Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2586g00004 ATGGAAGGAAGAAACGAAGGCTCGGAATGCTCCAAAACAAGCCCTTCTGGTTATAATAATTTCAACGAATTAGAAGAAGCGTGCGAGAGCGAGAGCAAGACGAATGAAGAAGAAGAAGGAGAAGAAGTTAAGAAAAATATGAACAATAATGGAGGAAGCTCAAGCAATAGCACAGTGGAAGAGACGACGGAGAAGAAGCCGTCGGTGAGGCCTTATGTGAGATCCAAGATGCCAAGGCTCCGATGGACTCCTGATCTTCATCTTCGCTTTGTTCACGCCGTTCAAAGGCTTGGAGGAGAAGAGAGAGCAACACCAAAGTTGGTTCTCCAATTAATGAACATCAAAGGCTTGAGTATTGCTCATGTTAAGAGTCATTTACAGATGTATAGGAGCAAGAAGGTAGATGATCCAAGCCAAGTATTGGCTGATCATAGGCACCTTGTAGAAAGTGGAGACAGGAATATCTACAATCTCAGCCAAATTCCCATGCTTCAAGGTTATAATCCCTCCCAAAGTTCAACCTTCAGATATGGATATGGGGAAGCTTCTTTGGGTGTGTATGACCAAATGGTTCACAGCCCTTTCATGGGTCGGAGTCTGATTGATCATGAAGCCGGGTCGTCTGGGTTTCACGGCATTTTCAAGGTGGACCCTTCAAATTTTCTGAAGCAATCATCGTCAACAAACAAAATCTATGAGCCAAAAGAAAATCATCAAGTTCTCTCATTTGGTGGCCACCACGAATCCATATACAATGGAACCAGATTGAACCAGAAAAACACTGATCTAAACTCATTCACCCTTATAGGAGCCACAAGAACAACAGAAGAACGGCTTCTTCCTATTATGAAGGATCAACAGGATCAAACAAAGACGCTGAAAAGAAGGGCTTATGATCATATGGATCAGCTTCATCATGATCATCTCGATTTGGATCTATCACTGAAGTTAAATTCAAGGGTTGATATTGATAATGCACAGAAGAAGAACCGTTTGGAAGAGAATGATGAAATCGATAGTAATCTCTCACTGTCTTTGTATTCTCAAATTTCCTCGTTTTCTGATACTAATAATAATGCTAGGAACAGCTCAAAGGAAGGAAAACAGAGTGATAAGGAGAAAGCAAGGAGGGAAAGGGCCAGTACACTGGATCTGACTATATGA 1164 0.4175 MEGRNEGSECSKTSPSGYNNFNELEEACESESKTNEEEEGEEVKKNMNNNGGSSSNSTVEETTEKKPSVRPYVRSKMPRLRWTPDLHLRFVHAVQRLGGEERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDDPSQVLADHRHLVESGDRNIYNLSQIPMLQGYNPSQSSTFRYGYGEASLGVYDQMVHSPFMGRSLIDHEAGSSGFHGIFKVDPSNFLKQSSSTNKIYEPKENHQVLSFGGHHESIYNGTRLNQKNTDLNSFTLIGATRTTEERLLPIMKDQQDQTKTLKRRAYDHMDQLHHDHLDLDLSLKLNSRVDIDNAQKKNRLEENDEIDSNLSLSLYSQISSFSDTNNNARNSSKEGKQSDKEKARRERASTLDLTI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2586g00004 387 SUPERFAMILY Homeodomain-like 76 132 IPR009057 -
Pral2586g00004 387 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 54 273 IPR046955 GO:0003700
Pral2586g00004 387 Coils Coil 21 41 - -
Pral2586g00004 387 Gene3D - 77 134 - -
Pral2586g00004 387 MobiDBLite consensus disorder prediction 46 62 - -
Pral2586g00004 387 MobiDBLite consensus disorder prediction 365 387 - -
Pral2586g00004 387 MobiDBLite consensus disorder prediction 353 387 - -
Pral2586g00004 387 Pfam Myb-like DNA-binding domain 80 130 IPR001005 -
Pral2586g00004 387 NCBIfam myb-like DNA-binding domain, SHAQKYF class 78 133 IPR006447 GO:0003677
Pral2586g00004 387 MobiDBLite consensus disorder prediction 8 25 - -
Pral2586g00004 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 134 IPR017930 -
Pral2586g00004 387 FunFam Myb family transcription factor 76 134 - -
Pral2586g00004 387 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2586g00004 Pral-Chr2586 51702 53670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2586g00004 1 162 G2-like Transcription Factor Family AT2G42660 45.198 5.41e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral2586g00004 Myb_DNA-binding 1.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2586g00004 - - pcin:129291537 491.115