Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2582g00008 ATGGCTTTCAAGCTCATGTCTCTCTTTAGCTTTACAGGCTCCGTTTTCCTTCTGCTTTCCTTCTTCGCATTGTTATCTCTGGCAGCAGATAACCCTGTGGCCACCCTCATAACCCCTCCGGACACTGTTTGCGACTCCACCTTGCACCCTTCCCTCTGCAAAACTGTGCTTGGTAATCAAAATGGCAATGTCTTTGACTTTGGCCGCATTTTGCTTCGAAGGTCCTTATCCCAGTCTCGTACGTTCTTGAACCAGGTGAATTCCATTCTGAGATCTCCATCCTCTCTGTCTCAGCCCACCATTCGAGCTCTCGAGGATTGTCGCTTCCTCGCTGAGCTCAACTTCCAGTTCTTATCCGACACCTTGGACGCTGTCAAAAATCTTAATGATTTCCTGTCTTCTTCCAAAGCCGAAGACCTTGAAACCCTGTTCAGTGCCGTTCTGACCAACCAGCAAACATGTCAGGATGGCCTTGAAACCACCACTTCGGATCGAAGAGTAAAGGACGATCTTTCTTCCTCGCTCTCCGACGACACCAAACTGCACAGCGTGTCTCTCGCTCTGTTCGCCAAAGGTTGGGTGCCCGAGAAGAAAATCATAACATCATGGCCACGCAATGGGAGGCATTTGGAATTCAGCAATGGTCGCCTGCCATTGAAAATGTCACCCCGAGTAAAGGCCATTTTCGACTCCGCAAAACGCCACGGCAGAAAACTGCTCCAGTCCGACGACGAAAGTGTGTCGATTACTGACATCGTGGTCGTCAGTCAGGATGGAAGCGGAAACTTCAGCACCATCAACGACGCCATCAATGCTGCCCCTAATAACACGGCTGCCGGTAACGGTTATTTCTTGATCTTCATCACCGAGGGTGTGTACCAAGAATACGTATCCATAGCCAAAAACAAAAAGTACTTGATGTTGGTGGGAGAAGGCATCAACCGCACCATCATCACCGGCGATCACAACGTCGTCGACGGTTCTACAACATTCAACTCAGCGACATTTGCCGTGGTAGCAGAAGGATTCGTGGCGGTGAACATTACATTCCGTAACACGGCGGGGCCGAGCAAGCACCAAGCCGTTGCCTTGAGAAGCGGAGCGGACAAGTCCACGTTCTACAGCTGCAGCTTCGAAGGGTACCAAGACACGCTTTACACACATTCTATGAGGCAATTCTACAGAGAATGTGACATATACGGCACCGTGGACTTCATATTCGGGAACGGAGCCGTGGTTCTGCAAAATTGTAACCTGTATCCCCGGCTTCCGATGAGCGGTCAGTTCAACGCCATCACGGCTCAGGGCCGGACGGACCCCAACCAGAACACGGGCACGTCCATACAGAACGCCACCATAAAAGCAGCCGATGATCTGGCTCCGTCGGTAGGGTCGGTGAAGACGTACCTCGGGAGGCCATGGAAGGAGTACTCGAGAACCGTATTTATGGAGTCATGGATGGACAGTCTGATCAATCCTGCCGGTTGGCGCGAGTGGAACGGGGACTTTGCTCTGAGCACGCTGTACTACGCTGAGTATAACAACAGTGGCCCCGGCGCTAACACGAGCAACAGGGTGACGTGGCCGGGCTACCACGTCATCAATGCCACGGATGCGGCAAATTTCACGGTGTCCAACTTCCTGACTGGGGATGCTTGGTTGCCGCAGACGGGGGTTCCGTACTCTAGCGGACTTGCGGCCTGA 1704 0.5241 MAFKLMSLFSFTGSVFLLLSFFALLSLAADNPVATLITPPDTVCDSTLHPSLCKTVLGNQNGNVFDFGRILLRRSLSQSRTFLNQVNSILRSPSSLSQPTIRALEDCRFLAELNFQFLSDTLDAVKNLNDFLSSSKAEDLETLFSAVLTNQQTCQDGLETTTSDRRVKDDLSSSLSDDTKLHSVSLALFAKGWVPEKKIITSWPRNGRHLEFSNGRLPLKMSPRVKAIFDSAKRHGRKLLQSDDESVSITDIVVVSQDGSGNFSTINDAINAAPNNTAAGNGYFLIFITEGVYQEYVSIAKNKKYLMLVGEGINRTIITGDHNVVDGSTTFNSATFAVVAEGFVAVNITFRNTAGPSKHQAVALRSGADKSTFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNGAVVLQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIQNATIKAADDLAPSVGSVKTYLGRPWKEYSRTVFMESWMDSLINPAGWREWNGDFALSTLYYAEYNNSGPGANTSNRVTWPGYHVINATDAANFTVSNFLTGDAWLPQTGVPYSSGLAA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2582g00008 567 Gene3D - 246 565 IPR012334 -
Pral2582g00008 567 PANTHER PECTINESTERASE 29 555 - -
Pral2582g00008 567 Pfam Pectinesterase 253 551 IPR000070 GO:0030599|GO:0042545
Pral2582g00008 567 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Pral2582g00008 567 NCBIfam pectinesterase inhibitor domain 15 189 IPR006501 GO:0004857
Pral2582g00008 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 191 IPR035513 -
Pral2582g00008 567 SUPERFAMILY Pectin lyase-like 251 564 IPR011050 -
Pral2582g00008 567 SMART PMEI_2 35 188 IPR006501 GO:0004857
Pral2582g00008 567 CDD PMEI-like_3 42 193 - -
Pral2582g00008 567 Pfam Plant invertase/pectin methylesterase inhibitor 42 188 IPR006501 GO:0004857
Pral2582g00008 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 190 IPR035513 -
Pral2582g00008 567 FunFam Pectinesterase 246 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2582g00008 Pral-Chr2582 37521 39620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2582g00008 15 565 Carbohydrate Esterase AT1G02810 58.925 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2582g00008 K01051 - gmx:100813051 852.818