Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2573g00006 ATGAAGTTTCAAAGGAAAAACTGCTTCATATTGCTTCTATTGTTCATCACTCTTGATCAAGCCTGTTCTCAAACCTCTGCTGCTGATTGCATCCTTGGAATTCAGTCTTCTACATCTTTGAATAATAGTAATAGCCCTGATTGTGAATTGCGCAGCTGGGGAGGTTTTATAAATAGCTGTTGTGATGGATTAGATTTCAATGCTTACCTTTATGCATCAGGGATGTCTGCCAACCAATCTGGAAAAATATACTTGAATTCCTCGGAGCAAGAAACTTGCCTTGCTTCAATGAATATTAAAGGATGTGGGGTGGAGAAGCTAAGGACTGGAGCTGGTGGTTGCTCCGACTTGTCTGTCATAGATGTTATGGACAAACTTGGAGAGAAGTTGAGAAGATTAGATGAAGATTGTATGGCTTTGAGCAAGGCAGAAAAAGAGACTTGTACGGCATGCTTAAGAAGGTGGGAAGAGATTAGTGCAATATCAATTGATAAAAAGGAGTCAGGCTCAGCAGATTTTGATGCTAATATTTGTAGATTTGCAGTACTAATCTCACTTACAAGCATCAGACTTTATGATAGGGACTTGATTCAAGCAGTTTGTGAATGCCTTGGAACCTACAGCCTTTCAGCAGGTAAGCAAATAGGCAAAACCGATGGCAGTTCTAAGCTCATCCCAGGTCTCTGGATATTACCTTTTGGCATAATTGGAATCGTAGTCCTAGGGTTTCTTGCAGTATGTATCTTGAATAGAAGAAGAAGAACTATTAGTTCTCCAACGAAACAAGAAGAGGCAGAGGATTCGAGCTCTCTTAAGATAACCATCAAGGAAGTTTATATGGCGACCAACAATCTTAATGCTTCAAATTATATTGGTCAAGGCATTGCTGGAAAAGTGTACAAAGGTCTACTTTCCAACGGTCAGCATGTAGCCATCAAGCATATTATGGGTGAAGCGTACCTGGAGACATTTGTTAGAGAAGTGAGAAGCCTTTCTCATGTCAGACATCAGAACTTGGTATCTTTGGCCGGATACTGTGACAGCGAGGGTGAATGCTTCCTAGTGTATGAGCTATGCCACGAAGGAAACCTCTCAGATTGGCTGTTTGACAAGGATAAAGTTCTTTCATGGATTCAGAGACTTAAGATTGCAGTTGATTGTGCAAGAGGTCTAATGTTTCTCCACACTTATCCAGGTGGCTGCATCATTCATCGTGACATTAAGCCATCAAACATTCTAATTGACACCAGCATGCAAGCAAAGCTTTCAGACTTTGGATTGTCCAAGGTAATGGAGCTCGACCAATCGTTTGTGAGCTCTGAGGTGAGAGGAACATTAGGTTACATTGATCCTGAATACCGGAAAAACCGCCATGTAAAAGCCTCCGGAGATGTCTACAGTTTTGGAATCGTATTGCTGCAACTTCTTTCAGGACAGAAGGTCATTGACTTCAATTTCCGGAGACCAATGTCCCTAGATAAAATGGTGAGAACCTAA 1497 0.4128 MKFQRKNCFILLLLFITLDQACSQTSAADCILGIQSSTSLNNSNSPDCELRSWGGFINSCCDGLDFNAYLYASGMSANQSGKIYLNSSEQETCLASMNIKGCGVEKLRTGAGGCSDLSVIDVMDKLGEKLRRLDEDCMALSKAEKETCTACLRRWEEISAISIDKKESGSADFDANICRFAVLISLTSIRLYDRDLIQAVCECLGTYSLSAGKQIGKTDGSSKLIPGLWILPFGIIGIVVLGFLAVCILNRRRRTISSPTKQEEAEDSSSLKITIKEVYMATNNLNASNYIGQGIAGKVYKGLLSNGQHVAIKHIMGEAYLETFVREVRSLSHVRHQNLVSLAGYCDSEGECFLVYELCHEGNLSDWLFDKDKVLSWIQRLKIAVDCARGLMFLHTYPGGCIIHRDIKPSNILIDTSMQAKLSDFGLSKVMELDQSFVSSEVRGTLGYIDPEYRKNRHVKASGDVYSFGIVLLQLLSGQKVIDFNFRRPMSLDKMVRT 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2573g00006 498 ProSiteProfiles Protein kinase domain profile. 285 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2573g00006 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Pral2573g00006 498 FunFam Os07g0541700 protein 360 445 - -
Pral2573g00006 498 Pfam Protein kinase domain 289 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2573g00006 498 SMART serkin_6 285 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2573g00006 498 SUPERFAMILY Protein kinase-like (PK-like) 268 484 IPR011009 -
Pral2573g00006 498 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 197 497 - -
Pral2573g00006 498 Gene3D Transferase(Phosphotransferase) domain 1 360 498 - -
Pral2573g00006 498 Coils Coil 123 143 - -
Pral2573g00006 498 Gene3D Phosphorylase Kinase; domain 1 247 358 - -
Pral2573g00006 498 FunFam Serine/threonine kinase protein 248 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2573g00006 Pral-Chr2573 54536 57241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2573g00006 268 490 Receptor kinase-like Gene Family AT5G59700 44.493 2.30e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pral2573g00006 Pkinase 2.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2573g00006 - - qsa:O6P43_033149 602.823