LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2571g00008	ATGTTACAGGTTAGTCCTGCACAAAAATTCCGAGAAAATGCTCAAAATGGTCAAAGTCCCGATCGTTGGCAGAAGTCCAATCAGACATACCCCATATATGTAGTCCCCCGTCTTGATTCAACACAGGCATGTTCTCTCATGGCTCATTCGTCAGGGTTCATCTCCGTCTTCCTCTTCCTCTTCCTTATTTGTCCCACAACAAGAAGTATTCATATGTGCGAGACATATTGCGACCCGAACGAATTTCCCGTTCAGTTCCCTTTCCAGTTGGTCAGAGACGAATTAGCGAATGGAAGCAACACTCGTTGTGGATACCCTGGTTTTGAACTTTCCTGCAACAAAAGCAGAACGATGCTTCATCTCCCACACGCTGGAGACTTCCTGGTGGATTTAATCTCCTATGAAGATCAAAAGCTTTGGATCAGAGACCCCGATAATTGCCTCCCCAGACGATTCATGAACAACGAATTCAACCTCACAGATTCCACCTTCCTGAACACTCAGCTTCAACCTCAGACTTCCTCCTTCCAACTCAGTTATGCTCCGAACTTCCCTTCTTCAACTGCTCCTCCAACATTTTCCCTTTCTACGCCATGGATCGAGGGGTGTAAGCCCATTTCCTCTGCTTCAGTTCCCTCTTCTATCCCCAATGGAATATTCTGGGGGGACCTGAATGCTGATATAGGCTTGCAATGGAACACTCCAAGCTGTGGAGACTGTGTGGCGAAGAATGGACGGTGTGAGTTCTTGAAGAATACAGGTCTTGAAGTCGCTTGCTATTTAACACACCAAGGTGGTCTTTCAAAGTTTGCCAAGTACGGATTAGGCTTTGGAGTGGGAATTCCTGGGTTGCTGAGTGTGATCGGAATCGTGTACATGTGTAAAGGGAGGCGAAGAAGGAACGAAGATGGAAGGCAAAGCAGAAATATTGAACTGAATAATGTCGCAGGGTGGTCGTCTATAGTAGTTATGGGGCTTGATGGAGAAAGCATAGACAAGTATCCTATGACTCGGATTGGGATAGTGGCGATTGCCCGACCCGGACACACAACGTTTGCTCTATATGCCTCAGTGATTACCAACCCCAAGACAGTTTGA	1098	0.4663	MLQVSPAQKFRENAQNGQSPDRWQKSNQTYPIYVVPRLDSTQACSLMAHSSGFISVFLFLFLICPTTRSIHMCETYCDPNEFPVQFPFQLVRDELANGSNTRCGYPGFELSCNKSRTMLHLPHAGDFLVDLISYEDQKLWIRDPDNCLPRRFMNNEFNLTDSTFLNTQLQPQTSSFQLSYAPNFPSSTAPPTFSLSTPWIEGCKPISSASVPSSIPNGIFWGDLNADIGLQWNTPSCGDCVAKNGRCEFLKNTGLEVACYLTHQGGLSKFAKYGLGFGVGIPGLLSVIGIVYMCKGRRRRNEDGRQSRNIELNNVAGWSSIVVMGLDGESIDKYPMTRIGIVAIARPGHTTFALYASVITNPKTV	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2571g00008	365	Pfam	Wall-associated receptor kinase galacturonan-binding	73	143	IPR025287	GO:0030247
	Pral2571g00008	365	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	53	340	IPR046948	-
	Pral2571g00008	365	MobiDBLite	consensus disorder prediction	1	24	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2571g00008	Pral-Chr2571	45357	46633	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2571g00008	77	340	C3H Transcription Factor Family	AT2G46495	27.562	6.48e-21	90.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2571g00008	-		-	pcin:129323052	275.404