Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2571g00005 ATGCTTCATCTCCCACACGCTGGAGACTTCCTGGTGGATTTAATCTCCTATGAAGAACAAAAGCTTTGGATCAGAGACCCCGATGATTGCCTCCCCAGACGATTCATGAACAAAGAATTCAACTTCACAGATTCCACCTTCCAACTCAGCGATGATTATAGCCTTATGGACTTCACCTTTTTCAACTGCTCCTCCAACGTCACCTGGCAGTACCGACTTCGACCCATCCCTTGCTTAAGCTCTGACCTCAACCAGAACTATTCGGTGGTCGCTGTTTGGTCAGATCCTCCCTTTCCTACGCCAGGGGTCGAGTGGTGTGAGCCCATTTCCTCTGTTACAGTTCCCTTTTCTATCACCAATACACTATACTCGGTGGACCGGAACGCTCATATAGGTTTGCAATGGAACACTCCAAGCTGTGGAGCCTGTGTGGCGAAGAATGGACGGTGTGAGTTCTTGAAGAATACAGGTCTTGAAGTCGCTTGCTATTTACCACACCAAGGTGGTCTTTCAAAGTTTGCCAGCTATGGATTAGGCTTTGGAGTGGGAATTCCTGGGTTGCTCAGTGTGATCGGAATCGTGTACATGTGTAAAGGGAGGCGAAGAAGGAACGAAGATGGAAGGCAAAGCAGAAATATTGAACTGAATAATGTCGCAGGGTGGTCGTCTATAGTAGTTATGGGGCTTGATGGAGAAAGCATAGACAAGTATCCGATGACCCGGATTGGGGATAGTGGACGATTGCCCGACCCGAACAACAACGTTTGCTCTATATGCCTCAGTGATTACCAACCCCAAGACAGTTTGAGGACAATCCCAGATTGCAATCATTACTTTCACGCCAATTGTATAGATTCATGGCTCCGCATGAACGCTACTTGTCCCTTGTGTCGAAAATTACCCCACCACTCGTAA 915 0.4754 MLHLPHAGDFLVDLISYEEQKLWIRDPDDCLPRRFMNKEFNFTDSTFQLSDDYSLMDFTFFNCSSNVTWQYRLRPIPCLSSDLNQNYSVVAVWSDPPFPTPGVEWCEPISSVTVPFSITNTLYSVDRNAHIGLQWNTPSCGACVAKNGRCEFLKNTGLEVACYLPHQGGLSKFASYGLGFGVGIPGLLSVIGIVYMCKGRRRRNEDGRQSRNIELNNVAGWSSIVVMGLDGESIDKYPMTRIGDSGRLPDPNNNVCSICLSDYQPQDSLRTIPDCNHYFHANCIDSWLRMNATCPLCRKLPHHS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2571g00005 304 ProSiteProfiles Zinc finger RING-type profile. 256 298 IPR001841 -
Pral2571g00005 304 SUPERFAMILY RING/U-box 251 300 - -
Pral2571g00005 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 302 IPR013083 -
Pral2571g00005 304 CDD RING-H2_EL5-like 256 298 - -
Pral2571g00005 304 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 301 IPR046948 -
Pral2571g00005 304 Pfam Ring finger domain 255 298 IPR001841 -
Pral2571g00005 304 SMART ring_2 256 297 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2571g00005 Pral-Chr2571 28783 30119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2571g00005 2 301 C3H Transcription Factor Family AT2G46495 32.026 1.71e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2571g00005 - - lja:Lj4g3v3004070.1 310.071