Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2570g00006 ATGGGTTGCTGCTTTAGTGCGAGTATCAAGTCTGAAAACCCTTCACGCAAGGTTGTGAATATAACCCATGATAGCAAACAACAAGATGGTTTGACTGGTGGAAGCAACAAGGTCTCCCAATTGAAAATTTTCAAATACGATGAGCTAAAAACAGCTACAAGGCACTTTCGTCCGCACAATATGGTGGGCGAAGGTGCATCTGGTAGGGTATTTAAGGGGTGGCTTGATGAGCAGACACTTGCACCTGCTAAACCAGGCACTGGGATAATCGTTGCTGTCAAGAAATTTAACCAAGAAGGCTTCGAGGGACACAAGGAATTGATGGCACAGATCAATCATCATCCTAACATTGTGAAATTGATTGGCTACTGCTTAGAGGATGACCATCGGTTTTTGGTATCCGAGTTTTTGACCACAGGCAGCTTGGAAAATCATTTATTTCTTAGGACATCTTATGATGAACCGCTTTCTTGGAGCAACCGTATGAAAATTGCCCTTGGTACTGCCAAGGTTCTTGCATTTCTTCATAGTGATGAAGTAAATGTGATATATCGAGATTTAAAAGCTTCTCATATCTTGCTTGATTCAAACTTCAATGCAAAGCTATCTGATTTTAGTTTGGCAAGGGGCGGACCATCGGGTGATGAGAGCCATGTCTCTACAAGGGTCATGGGAACCTTTGGCTTCGCTGCTCCTGAGTATATAGCCACAGGTCACCTGACAAAGAAGTGTGATGTATACAGTTTTGGGGTTGTTCTGCTTGAAATTCTGTCAGGCAAACGTGCACTGGACAGAAACAGGCCAGCCGGGGAACAGAATTTAGTTGAATGGGCCAAGCCGTACCTTCTGAGCAAACGCCGGATTTTCAAAGTTATGGATGCCCGTATCGCAGGCCAGTACCTGGCAAGCGAAGCCATGAAAGTGGCCAAAATCGCGATTCAATGCCTGTCTGTTCAACCCCAGTTCAGACCGACCATGGCCGATGTGGTAAGAGCATTGGAACAGGTTCAGGATTCCAGTGATACAGGTAGCTCAAGCAGAAGCAGTGGTAGTGTTCCTGAACAACGTTAA 1071 0.4519 MGCCFSASIKSENPSRKVVNITHDSKQQDGLTGGSNKVSQLKIFKYDELKTATRHFRPHNMVGEGASGRVFKGWLDEQTLAPAKPGTGIIVAVKKFNQEGFEGHKELMAQINHHPNIVKLIGYCLEDDHRFLVSEFLTTGSLENHLFLRTSYDEPLSWSNRMKIALGTAKVLAFLHSDEVNVIYRDLKASHILLDSNFNAKLSDFSLARGGPSGDESHVSTRVMGTFGFAAPEYIATGHLTKKCDVYSFGVVLLEILSGKRALDRNRPAGEQNLVEWAKPYLLSKRRIFKVMDARIAGQYLASEAMKVAKIAIQCLSVQPQFRPTMADVVRALEQVQDSSDTGSSSRSSGSVPEQR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2570g00006 356 MobiDBLite consensus disorder prediction 335 356 - -
Pral2570g00006 356 ProSiteProfiles Protein kinase domain profile. 56 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2570g00006 356 ProSitePatterns Protein kinases ATP-binding region signature. 62 95 IPR017441 GO:0005524
Pral2570g00006 356 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Pral2570g00006 356 Pfam Protein tyrosine and serine/threonine kinase 60 333 IPR001245 GO:0004672|GO:0006468
Pral2570g00006 356 Gene3D Transferase(Phosphotransferase) domain 1 137 351 - -
Pral2570g00006 356 SUPERFAMILY Protein kinase-like (PK-like) 37 334 IPR011009 -
Pral2570g00006 356 PANTHER OS01G0588500 PROTEIN-RELATED 38 337 - -
Pral2570g00006 356 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 137 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2570g00006 Pral-Chr2570 41501 45183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2570g00006 12 333 Glycoside Hydrolase AT3G07070 46.809 6.01e-95 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral2570g00006 PK_Tyr_Ser-Thr 2.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2570g00006 - - gmx:100800735 479.559