Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2570g00005 ATGGGTTGCTGCTTTAGTGCGAGAATCAAAGCTGAAAGCCCTCCACGAAAGGCGAGGAACTCAAGCCATGACAGCAAAGAAGAGGATGGTTTGATGGGTGGAAGCAGCAAGTTCTCCACTTCCTCGGTGCCCCCAACTCCCCGAACAGAGGGTGAGATCATGCAGTCCTCCAATTTGAAAAATTTCACATATAACGAGCTAAGAACAGCTACAAGGAACTTTCGTCCTGACAGTATGGTGGGCGAAGGCGGGTTTGGTGGCGTATTTAAGGGATGGCTTGATGAGCAGACACTTGCACCTGCTAAACCGGGCACTGGGATAGTCATTGCTGTCAAGAAGCTTAACCAAGAAAGCTTCCAGGGACACAATGAATGGTTGACAGAGATCAATTTCCTGGGACATCTGCACCATCCTAACCTTGTGAAATTGATTGGCTACTGCTTAGAGGATGACCATCGACTTTTGGTATATGAGTTTTTGACCAAAGGCAGCTTGGATAATCATTTATTTCGAAGGACATCTCATGTTGAACCACTTTCTTGGAGCAACCGCTTGAAAATTGCCCTTGATGCCGCAAAGGGTCTTGCATTTCTTCATAGTGACAGAGTAAAAGTGATATATCGAGACCTAAAAGCTTCTAATATCTTGCTTGATTCAAACTTCAATGCAAAGCTATCTGATTTTGGATTGGCCAAGGATGGACCATCAGGTGATCGGAGCCATGTCTCTACAAGGGTCATGGGCACATATGGCTATGCTGCTCCTGAGTATATGGCCACAGGTCACCTGACAAAGAAGAGTGATGTATACACTTTCGGGGTTGTTCTGCTTGAAATCATGTCAGGCAAACGTGCGTTGGACAGAAACAGGCCATCCAGGGAACAGAATTTAGTTGAATGGGCCAAGCCGTACCTTTCGAGCAAGCGCCGGATTTTCCAAGTTATGGATGCTCGTATCGAAGGCCAGTACCTGGTACGTGAAGCCATGAAAGTAGCGAAAATCGCAATCCAATGCCTGTCTGTAGAGCCCCGGTTCAGACCGACCATGGCTGATGTGGTCAGAGCATTGGAGCAGCTTCTGGATACCAGTGATACTGGTGGCCCAAGCAGCAGCAGTACTAATAATGTTCCTAAACAGCACAAGAGAAGTACGAGTGAATCTTTAAATGGGGTTGACACTTCTAAACCCACATCATCTGCATCTCATTCCACATAA 1215 0.4658 MGCCFSARIKAESPPRKARNSSHDSKEEDGLMGGSSKFSTSSVPPTPRTEGEIMQSSNLKNFTYNELRTATRNFRPDSMVGEGGFGGVFKGWLDEQTLAPAKPGTGIVIAVKKLNQESFQGHNEWLTEINFLGHLHHPNLVKLIGYCLEDDHRLLVYEFLTKGSLDNHLFRRTSHVEPLSWSNRLKIALDAAKGLAFLHSDRVKVIYRDLKASNILLDSNFNAKLSDFGLAKDGPSGDRSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYTFGVVLLEIMSGKRALDRNRPSREQNLVEWAKPYLSSKRRIFQVMDARIEGQYLVREAMKVAKIAIQCLSVEPRFRPTMADVVRALEQLLDTSDTGGPSSSSTNNVPKQHKRSTSESLNGVDTSKPTSSASHST 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2570g00005 404 Gene3D Transferase(Phosphotransferase) domain 1 160 381 - -
Pral2570g00005 404 PANTHER OS01G0588500 PROTEIN-RELATED 30 359 - -
Pral2570g00005 404 MobiDBLite consensus disorder prediction 361 404 - -
Pral2570g00005 404 SMART serkin_6 74 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2570g00005 404 MobiDBLite consensus disorder prediction 1 56 - -
Pral2570g00005 404 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
Pral2570g00005 404 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Pral2570g00005 404 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Pral2570g00005 404 MobiDBLite consensus disorder prediction 12 31 - -
Pral2570g00005 404 FunFam Serine/threonine-protein kinase PBS1 160 375 - -
Pral2570g00005 404 CDD STKc_IRAK 105 359 - -
Pral2570g00005 404 MobiDBLite consensus disorder prediction 34 56 - -
Pral2570g00005 404 ProSitePatterns Protein kinases ATP-binding region signature. 80 113 IPR017441 GO:0005524
Pral2570g00005 404 SUPERFAMILY Protein kinase-like (PK-like) 45 356 IPR011009 -
Pral2570g00005 404 MobiDBLite consensus disorder prediction 362 404 - -
Pral2570g00005 404 ProSiteProfiles Protein kinase domain profile. 74 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2570g00005 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2570g00005 Pral-Chr2570 35137 38732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2570g00005 4 386 Glycoside Hydrolase AT3G07070 44.557 1.51e-109 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral2570g00005 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2570g00005 - - gmx:100800735 604.364