Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2568g00002 ATGGATAGACAGCGCAACAACCATGAAACGTCGTCGTTTTTCGATTGTGCCTGTACTTGCTTTCTGTTTTGCTTCTTCGAGCAGGGAAGTTCCCTCAGCGAGCTTCACGAGGCGACAGCAGAGTTCGAGCGATTGAACTACAAATTGGCTTCGACATTGTCTGAATCAGATCAGGGAAAATGGAAACTAGGAGTGAATGAATCGTTTACTGTTTCGTACCTCATGAGTTCGCTGGGCTTGTCCCGCAAAGTAGCTACTGAAGTATCCAAAAAGGTTCAATTGAAAAACCCTGATAAACCCAATTCGGTGCTTAATCTTTTTAGGAGCTATGGATTCTCAGATACCCAGATATCTATAGTTGTGAAAATGCATCCACGAGTGCTTTCGGCTAACCCTGAGAAGACCCTTTTGCCTAAGCTAAGGTTTCTCCAGTCAATTGGGCTTTCGAGTTCTGAACTCCAAGATGTCCTCATTTCAAACTATTGTCTCCTCGGTATGAGCTTAGAACAATGTATAATCCCTTGTTTTGAGGCCCTTAGGAGTTTTCTCGACAATGATGAGGAAGCAAAAATAGCTTTAAAACGCTTTAAGTGGTTGCGTTCCCGCCAGGGCGTGACAAATTTAGCTCAAAATATTATGGTTTTGAGAGATATTGGAGTGCCCCGATCGTCTATCTCTCTACTGGCAACTAAATACATAGATTCAGCATTTCTGAATCATGCAAATTTTGTTGAATATGTCCAGTTTGCTAAGGAAGCAGGAGTTGATCCTTCCAAGTCTTTGTTCATTAATGCTGTTGCCGTTCTAGGACGCTTAAAGAAATCTACTTGGCAGTCGAAACTGGATATCTTCAAGAGGTATGGTTGGACCAGAGATGTCACTCTCTCAGTCTTCAGCAAACATCCACAATGCTTGATGCTGTCTGAGAAGAATATCACAAAGTCAATGTCATTTCTTGTGGATGAAGTGGGTATCCCGTTGGAAGGTATAGCTGCACGCCCAAAGTTACTTCATTATAGTTTGGAGCAGAGGATTATTCCTCGATACTCAGTAATTAAAGTTTTGAAAATGAAAGGTTTGGTAAAGAAGAATATCTCCTTCATTTCTATTGTCAGTTATACTGAGAAAAAGTTTGTAGAGAAATTTGTGACCAGATTTCACGAAAGTGTTCCTCAGCTATTGAACATCTATAAAGGTCCTTCAGGACGTTTATCCAAAGTTCAGTGA 1227 0.4108 MDRQRNNHETSSFFDCACTCFLFCFFEQGSSLSELHEATAEFERLNYKLASTLSESDQGKWKLGVNESFTVSYLMSSLGLSRKVATEVSKKVQLKNPDKPNSVLNLFRSYGFSDTQISIVVKMHPRVLSANPEKTLLPKLRFLQSIGLSSSELQDVLISNYCLLGMSLEQCIIPCFEALRSFLDNDEEAKIALKRFKWLRSRQGVTNLAQNIMVLRDIGVPRSSISLLATKYIDSAFLNHANFVEYVQFAKEAGVDPSKSLFINAVAVLGRLKKSTWQSKLDIFKRYGWTRDVTLSVFSKHPQCLMLSEKNITKSMSFLVDEVGIPLEGIAARPKLLHYSLEQRIIPRYSVIKVLKMKGLVKKNISFISIVSYTEKKFVEKFVTRFHESVPQLLNIYKGPSGRLSKVQ 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2568g00002 408 Gene3D Transcription termination factor 3, mitochondrial 170 389 IPR038538 -
Pral2568g00002 408 Pfam mTERF 263 378 IPR003690 GO:0003690|GO:0006355
Pral2568g00002 408 Pfam mTERF 104 316 IPR003690 GO:0003690|GO:0006355
Pral2568g00002 408 FunFam Mitochondrial transcription termination factor-like 168 390 - -
Pral2568g00002 408 PANTHER CGI-12 PROTEIN-RELATED 67 385 IPR003690 GO:0003690|GO:0006355
Pral2568g00002 408 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Pral2568g00002 408 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Pral2568g00002 408 SMART mt_12 327 358 IPR003690 GO:0003690|GO:0006355
Pral2568g00002 408 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2568g00002 Pral-Chr2568 4318 5968 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral2568g00002 mTERF 3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2568g00002 K15031 - cave:132171724 311.227