Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2566g00014 ATGGCCGATGTGAAGAACGGCCAAGATAATCATCAGGGGATAAAGCTGTTTGGGGCTACGATCACGTTGCATCGGGGAAGAAAAGGGGATCAGAAGGTGGTGGAGGAGGATCGGGCGACGCCGGAGAAGAGGCCGGACAAGATCATACCGTGTCCCAGATGTAACAGCATGGACACCAAGTTTTGTTACTTCAACAATTACAACGTTAATCAGCCGAGGCATTTCTGTAAGGGGTGCCAGAGGTACTGGACCGCCGGCGGTGCCCTCCGGAACGTGCCCATCGGGGCCGGCAGGAGGAAGGCCAAGCCACCTTGCCGTGGGCCTGCTGGATTCTCCGAGGGTTGTGGCTACGAGGAATCTGTCGACGGCGGTCACCGCCAGTTTGTTTTGGATGAGGGGTTGAATATTATGGAGGAGTGGCATGTCGCGATGGCTCAGAGTGGTTTCCGGCACCTTCTGCCAGCAAAACGGCCGAGGAACACCATTGCCGGTCAACCTTTTTAA 504 0.5595 MADVKNGQDNHQGIKLFGATITLHRGRKGDQKVVEEDRATPEKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPCRGPAGFSEGCGYEESVDGGHRQFVLDEGLNIMEEWHVAMAQSGFRHLLPAKRPRNTIAGQPF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2566g00014 167 PANTHER CYCLIC DOF FACTOR 2 37 102 IPR045174 GO:0003700|GO:0006355
Pral2566g00014 167 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Pral2566g00014 167 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Pral2566g00014 167 Pfam Dof domain, zinc finger 47 102 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2566g00014 Pral-Chr2566 33271 34099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2566g00014 10 165 C2C2-Dof Transcription Factor Family AT1G29160 55.429 1.55e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral2566g00014 zf-Dof 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2566g00014 - - qsa:O6P43_012767 216.853