Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2566g00001 ATGGAAGTTATGACATACACCATCAACGGAAAACAGAGCAACAAAGCAGGTTTCCAAATCTTCACTCTCCAAAATTATCATTTTGGTTCGCTCCCACAACTCGTCCCCCCGGTTTTCGTCTTCTGCTCCGGAATTAATATCAATAGAAGATCTGTGACTATGGTTTACTGCTCTTATAATTCGGTCTCTTCATCTGGGTCTGATGTCTCGAGGCTGTTCGATCCAACTTCGCATAAAATTGTTGACTCTAATGGGGTTTCACAGAGTAGGCTGGCGTCACCGAATTCGTTGGTCTTGAATAGTCAGAAGGGGGATCTAATTAATTTCCCTATGAAGATAGGAAAGAAAGAGGCGTCGGAGGCAAAAGCTTTGGCTGCTATGAAGAACCACAGTGAAGCAGAGAGAAGAAGAAGGGAGAGAATAAATGGTCATCTCGATGCACTTCGTGGTCTTGTGCCCAGCAATGTGAAGATGGATAAAGCAACGTTATTGGGTGAAGTTATCAACCAAGTTAAGTTACTGAAGAAGAATGCAATGGAAGCAAGCAGAGGTTTTCTCATCCCAATGGATGATGATGAAGTTAAAGTTGAACCATACAACGATGAAGGAAGAGGAGGATCAATGTTTTACATGGCATCTATATGTTGTGATTACCGGCCGGAGCTACTATCTGACCTAAGACAAGCTCTTGATGGGCTTCAACTGCAATTAATGAGGGCAGAAATATCAACTTTGGGAGGAAGGGTGAAGAATGTATTTTTCTTTAGGTGCTGCAAAACAGAACATATTAATATTGGGGCATGCCAACTTGTTCCAAGTACTGTCCACCAGGTACTAAGTTCTGTACTGGAGAAGGCTTCTAGCTCACTGGAACACTCCTTGGGAATGTCACTTCGAAGTAAGCGTAGAAGACTTTGCTTCATTGAAACATCAACTTCCTCATGA 945 0.4254 MEVMTYTINGKQSNKAGFQIFTLQNYHFGSLPQLVPPVFVFCSGININRRSVTMVYCSYNSVSSSGSDVSRLFDPTSHKIVDSNGVSQSRLASPNSLVLNSQKGDLINFPMKIGKKEASEAKALAAMKNHSEAERRRRERINGHLDALRGLVPSNVKMDKATLLGEVINQVKLLKKNAMEASRGFLIPMDDDEVKVEPYNDEGRGGSMFYMASICCDYRPELLSDLRQALDGLQLQLMRAEISTLGGRVKNVFFFRCCKTEHINIGACQLVPSTVHQVLSSVLEKASSSLEHSLGMSLRSKRRRLCFIETSTSS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2566g00001 314 Gene3D - 120 183 IPR036638 GO:0046983
Pral2566g00001 314 PANTHER TRANSCRIPTION FACTOR BHLH30 88 309 IPR045847 GO:0003700|GO:0006355
Pral2566g00001 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Pral2566g00001 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 177 IPR036638 GO:0046983
Pral2566g00001 314 Pfam Helix-loop-helix DNA-binding domain 129 174 IPR011598 GO:0046983
Pral2566g00001 314 SMART finulus 131 180 IPR011598 GO:0046983
Pral2566g00001 314 Coils Coil 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2566g00001 Pral-Chr2566 2264 5346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2566g00001 112 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.538 3.43e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral2566g00001 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2566g00001 - - gmx:100804756 322.013