Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2565g00066 ATGGAGTCGTCGGCCGTTCGGCGGTGCAAGCGATGCGCAGGTTCTTGGCGGTGCTCCGCGGTGGCGTCGCGGGGAAAGTCGTACTGCAAGAAGCACCTGGCGCAGAGGGAGAGTTACGACCTGAAACATAGAACCAAGGAAAAAGGAGGAGAGGAGGTGGAGATATACCATGATTCCAGCTCCAGGAAAAGGAAGAATGCTGTAGTCTGCAGGGAATCGGAGGTGGCAGTGTCAGATTCCGAGTTGAAACGAAAATCGGTCCGAGTTCGAGAGTTGAAGCTCTCGGCTAGTTCGAAGCATAACAAAATGAGTGATGGTAGAAGAGTAAATAACACCATGAAGGCAGCGTTGAAGGTAAATTCCGATGAAGAGCGGGGGCGGAATTATTCCTCGCTGGAGAAACATTCCATGGTTACGGATTTGCTCAGGAAAACAAAGGAGGGTGGAAGTTTGATGTGTCATCAGTGCCTGCGGAGTGACAAGAATGGTGTAGTCATCTGCTTAATGTGTGGCAGAAAACGCTACTGTTTTGATTGCCTCAAGAAGTGGTACCCAGGAAAAGCAAAAGAGGAAGTTGAGAATAGATGTCCATATTGTTGTGGCAATTGCAATTGCAAAGCTTGCCTGCGAGAGGTTCCTGTGCCAAGGCATCCAGAAATGGATGACAGTGCCAAAATTGAACGACTACTTTATTTGCTATACAATGCTCTGCCCGTTCTTAGGCATATTTATAAGGAGCAGAGCTCTGAGCTAGACACTGAAGCAAAAATGAGAGGTTATCAACTGCAAGAAATTAACATAACAAGGACTAAGTTAGATGGAAGTGAGCGTATGTACTGCGACAATTGCAACACATCGATTGTTGGATTTTACAGAAGCTGTCCCAACCTCGGTTGCTCTTACGACCTATGTCTTGCCTGCTGTCAAGAGCTTAGAAATGGTTGCCAACCTGGAGGCGTAGAAGCTGAAACATTGCGTGAACAGTTTGCAGAGAAAGATGGAAACCAAGATTCGATAAGTAGCAAGACTCGTACGGAAGGATATGGTTGGGAAAGCCAACTCTTACCTAATGTGTTTGATGTCCAAACTGATGGAACTTCTCCATCTCCTGAATGGCGAGCTAATAGTGATGGTAACATTCCATGTCCTCCAAAACAGCATGGAGGTTGTGGCACTGCGTTGCTAGAACTGAGACGCACTTTCAAAGCTGATTGGGTGGTGAAGCTGTTAAAGAATGCAGAGGACCTCACAAGAGCCTACAGACACATGGACGTTGATGTTTCTGCGAAATGCTCTTTATGCTGGCCAAATTTGGTTGAAGGGAAATCCAATTATGAGGTCAGGCAGGCAGCATCAAGGGATGATGCTCAAGATAATTTCTTATACAGCCCGAATGCCCTTGACACGTCTGATGACGAAGTTGAGCATTTCCAGAGGCACTGGTTAAGGGGAGAACCTGTGATTGTGAGAAATGTTCTGGACAGGACATCTGGCCTTAGTTGGGAACCAATGGTTATGTGGAGGGCTTTCAGAGAAACAGGTTCTAGAATGAAGTATAAAGAGGAAACACGAAGTGTAAAGGCCATCGATTGCTTTGATTGGTGTGAGGTGGAAATCAATATTCACCAATTTTTTGTAGGCTACCTAGAGGGTCGAATGCATAAGGATAGATGGCCAGAAATTCTGAAATTGAAAGATTGGCCTTCATCAACCTGGTTTGAAGAGCGTTTGCCCAGGCATGGTGCTGAGTTTCTCAGAGCTCTGCCCTACAGGGACTACACTGACCCAAAATCAGGCCTCTTGAATCTTGCCAGTAAACTTCCTGATGGCTCACTAAAACCAGATTTGGGACCCAAAACGTATATTGCTTATGGGTTTCTTGACGAGCTTGGTAGAGGTGATTCGGTGACAAAACTCCACTGTGATGTGTCTGATGCGGTTAATATACTGACCCACACAACCAAGGTAAATATAGGTGCTTGGCAACAAGAAAGCATAAAAGAATTGCGGGAGAAATATGCAAAAGAAGACATGCAGGAACTATCCTGTGAAGCACGCAGTGATATTGATGAAGAACCCAAAGCAAATGATGGGAAGCCTGAAGATGGAGTTAACAGTTTTTCTTCTGGTCGCCAAGTAGATGAACATATTTCATCAGCATCGGAAGGCTCAACTGTGAAGCCAGAAATTTCATCAGCAGTGAAAGAGTCAACTATGAAGTTAGAAAGTTCATCGGCATCGGAAGACTTTACTGTGAAGATAAACATTTCATCAGCATCAGATGGCTCAACCGCGAAGTTAGAAACAACAGACACAGAACAATGTGTTGAGAGCAGAAACTGCTCCGCCTCCTGCAGAAATGTTGCCGAAAGAAGTTTCTCTGGAGAAGATGATGTTAATATAATATCTGCTGAAGTTTCAGATCATACCAAGACTTTCGGACGGAAACATGAACATACTCAATCTGCGTGTAATTTAACCTCTAATTGTAAGAGCAATGTTAATGACAGAACGAAGACTGATTTTCTTGGCATTTTGTCTGATGATCCAGAGTCCCAAAAATCAAAACAAGGTCTGGTGAAAGATTCTGTAGAAACTAATCATAAAGCTGCAGTCGTCTATGGTGGTGCTGTTTGGGATATCTTCCGTCGTCAAGATGTACCAAAAGTAATGGAGTATTTGAGGAAGCATAAAAAGGAATTCCGTCATATCAGCAATCATTCTTTAAGTTCTGTTATACATCCCATTCATGATCAGACATTTTTCTTTAATGAGAAGCATAAGAAACAATTGAAACAAGAGTTTGGTGTTGAACCCTGGACTTTCGAGCAACATCTTGGTGAGGCCGTTTTCATTCCCGCTGGATGTCCCCACCAAGTGAGAAATAGACAATCTTGTATAAAAGTGGCACTTGATTTTGTTTCCCCGGAAAATGTTGAAGAATGTTTACGACTAACTGAGGAGTTTCGTTTGCTCCCAAAGAAGCACACAGCCAAGGAGGATAAATTGGAGGTTAAAAAGATGACACTTTATGCTGTAAGTTCGGCTGTTAGAGAAATCAAAAGACTGATGAAGTCTGCCGATTGA 3087 0.4383 MESSAVRRCKRCAGSWRCSAVASRGKSYCKKHLAQRESYDLKHRTKEKGGEEVEIYHDSSSRKRKNAVVCRESEVAVSDSELKRKSVRVRELKLSASSKHNKMSDGRRVNNTMKAALKVNSDEERGRNYSSLEKHSMVTDLLRKTKEGGSLMCHQCLRSDKNGVVICLMCGRKRYCFDCLKKWYPGKAKEEVENRCPYCCGNCNCKACLREVPVPRHPEMDDSAKIERLLYLLYNALPVLRHIYKEQSSELDTEAKMRGYQLQEINITRTKLDGSERMYCDNCNTSIVGFYRSCPNLGCSYDLCLACCQELRNGCQPGGVEAETLREQFAEKDGNQDSISSKTRTEGYGWESQLLPNVFDVQTDGTSPSPEWRANSDGNIPCPPKQHGGCGTALLELRRTFKADWVVKLLKNAEDLTRAYRHMDVDVSAKCSLCWPNLVEGKSNYEVRQAASRDDAQDNFLYSPNALDTSDDEVEHFQRHWLRGEPVIVRNVLDRTSGLSWEPMVMWRAFRETGSRMKYKEETRSVKAIDCFDWCEVEINIHQFFVGYLEGRMHKDRWPEILKLKDWPSSTWFEERLPRHGAEFLRALPYRDYTDPKSGLLNLASKLPDGSLKPDLGPKTYIAYGFLDELGRGDSVTKLHCDVSDAVNILTHTTKVNIGAWQQESIKELREKYAKEDMQELSCEARSDIDEEPKANDGKPEDGVNSFSSGRQVDEHISSASEGSTVKPEISSAVKESTMKLESSSASEDFTVKINISSASDGSTAKLETTDTEQCVESRNCSASCRNVAERSFSGEDDVNIISAEVSDHTKTFGRKHEHTQSACNLTSNCKSNVNDRTKTDFLGILSDDPESQKSKQGLVKDSVETNHKAAVVYGGAVWDIFRRQDVPKVMEYLRKHKKEFRHISNHSLSSVIHPIHDQTFFFNEKHKKQLKQEFGVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVEECLRLTEEFRLLPKKHTAKEDKLEVKKMTLYAVSSAVREIKRLMKSAD 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2565g00066 1028 ProSiteProfiles WRC domain profile. 3 49 IPR014977 -
Pral2565g00066 1028 MobiDBLite consensus disorder prediction 702 731 - -
Pral2565g00066 1028 Pfam JmjC domain, hydroxylase 877 973 IPR003347 -
Pral2565g00066 1028 MobiDBLite consensus disorder prediction 680 699 - -
Pral2565g00066 1028 MobiDBLite consensus disorder prediction 680 731 - -
Pral2565g00066 1028 ProSiteProfiles Zinc finger RING-type profile. 153 199 IPR001841 -
Pral2565g00066 1028 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 46 1026 IPR045109 GO:0032454|GO:0033169
Pral2565g00066 1028 Gene3D Cupin 464 698 - -
Pral2565g00066 1028 Gene3D Cupin 796 999 - -
Pral2565g00066 1028 ProSiteProfiles JmjC domain profile. 596 990 IPR003347 -
Pral2565g00066 1028 SMART cupin_9 577 990 IPR003347 -
Pral2565g00066 1028 SUPERFAMILY Clavaminate synthase-like 474 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2565g00066 Pral-Chr2565 402296 410118 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral2565g00066 JmjC 1.6e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2565g00066 K15601 - cave:132187182 1083.55