Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2565g00051 ATGGAGGACCATATTGTCACCACGAAGGCCTACAATCTCTTCGTGAAGCTCTTAGACGGAAAAACCCTAGCCCTAAAATTCCCATCTCCTATTCTTTATGCCAATTCCATAAAGGATCGCGTTTTCGAGGTTACCAGAATCCCCATACAACACCAGCGCCTTGTTACTGGCGTCCGAGACCTTAACGGTAACGAATCTGTAATCTCCTGCTCGCCGGAAGGCGGAGATGTGTTCCCCACCGTCCATCTGCTGCTGCGGCTCGCTGGTGGCAAGGGAGGGTTTGGATCGCTTTTGCGTGGTGCGGCCACAAAGGCTGGGCAGAAGAAGACGAACAACTTCGAGGCTTGTAGAGATATGAGTGGCCGAAGGTTGAGGCACGTGAACGCGGAGAAGAGACTGGAGGAATGGAAGGCGGAGGAGGCGGAGAGGAAGCTGGAGAAGATTGCGGAAGAGTTTTTGAAGAAGCAGGCGAAGAAGGGTAAAAAGGGTGTGGGTGATGGCGAGGCGCACAAGTATGTGGCAAAATATAGGGAGGAGTCTGAGCGATGCACTGCTGAAGTCGCCGAGTCGGTGAAGGAGGCTCTGATGTCTATCAATGGCAAGAGAAAGGTTCCAGATTTTGGAAAAGGTCGAGCAGATGCAAAGAAGATGAAGATATGGATGGGAAAGAGGAAATTAAATGAAAGTGATAGTGATGATTCTGATGACGATGGCAATGATGACGAAGAAGAAAACGAGAAATCAACTGTATTAAATAATGAGAATGACTCAGAGTCAAATAAAGCTGAAGGCAGTTCAGGTTCAGTAACTGGTGGCAAACGGGATGGTGAATCTTCTGTAGCAGGCTCCAGTGGAAGTTGCTCTGAAGAAGAGAAAGAGACTGTTGTAGAAGGAAAAATAGACTCTAGCGGAAGTCTTAACATTGAATCTCTCCAGAACATAACGGCCAATTTGGTTGAACCTGTGATATGTGATAAGATGGCAACTGGTGTCACTATGCCTGTTTTGGAGCCTCCAGCGTTGGTAATCGATGCTGCAGAAGATGGAAGGCTTGACTCTAGTGAAGCTGACAGGCTTGATTCAGCAGCTGCTCAAGCCACTAATCTTATAAGCTCAGAGCATGTGGTGGATTCTAACAAATCAAATGATATTGGAACTGATGGATTGCATGAGCATAAAGCATCATCTCATGAAGAAACTCACACAAGTGCCAGTGCGCAGGAAATAGAGGAGCCTTTGAGCTTTGATTCATTTAACTCAGCTGCAGAACTTGAGGTTCTTGGCCTGGAAAGGTTGAAGTCCGAACTGCAGGCACATGGGTTGAAATGTGGAGGCACATTGCAGGAGCGTGCTGCCAGGCTTTTCCTTCTAAAATCGACTCCACTGGATAAACTTCCTAAAAAGTTGCTTGCCAAAAAGTGA 1422 0.4719 MEDHIVTTKAYNLFVKLLDGKTLALKFPSPILYANSIKDRVFEVTRIPIQHQRLVTGVRDLNGNESVISCSPEGGDVFPTVHLLLRLAGGKGGFGSLLRGAATKAGQKKTNNFEACRDMSGRRLRHVNAEKRLEEWKAEEAERKLEKIAEEFLKKQAKKGKKGVGDGEAHKYVAKYREESERCTAEVAESVKEALMSINGKRKVPDFGKGRADAKKMKIWMGKRKLNESDSDDSDDDGNDDEEENEKSTVLNNENDSESNKAEGSSGSVTGGKRDGESSVAGSSGSCSEEEKETVVEGKIDSSGSLNIESLQNITANLVEPVICDKMATGVTMPVLEPPALVIDAAEDGRLDSSEADRLDSAAAQATNLISSEHVVDSNKSNDIGTDGLHEHKASSHEETHTSASAQEIEEPLSFDSFNSAAELEVLGLERLKSELQAHGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2565g00051 473 Coils Coil 124 158 - -
Pral2565g00051 473 MobiDBLite consensus disorder prediction 252 289 - -
Pral2565g00051 473 SUPERFAMILY Ubiquitin-like 11 91 IPR029071 -
Pral2565g00051 473 PANTHER SPLICING FACTOR SF3A-RELATED 12 472 - -
Pral2565g00051 473 MobiDBLite consensus disorder prediction 373 408 - -
Pral2565g00051 473 Gene3D - 4 92 - -
Pral2565g00051 473 MobiDBLite consensus disorder prediction 223 298 - -
Pral2565g00051 473 Pfam Silencing defective 2 N-terminal ubiquitin domain 11 161 IPR024974 -
Pral2565g00051 473 Pfam Replication stress response SDE2 C-terminal 398 472 IPR025086 -
Pral2565g00051 473 MobiDBLite consensus disorder prediction 384 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2565g00051 Pral-Chr2565 265282 268699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2565g00051 413 472 C2H2 Transcription Factor Family AT5G06160 51.667 6.70e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2565g00051 K25059 - gmx:100799364 465.307