Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2565g00031 ATGGACAAGTGCCGCAGAAAGCAAGAAAAGACTGAAAGCTCTTACTCGGAAGAGGTGAGCAGCATTGAATGGGAGTTCATAAACATGTCAGAACAAGAAGAGGATCTCATTTACAGAATGTACAAACTGGTGGGAGACAGATGGAGTCTGATAGCAGGTAGGCTTCCAGGTCGAAAGGCTGAAGAAATTGAGAGGTTTTGGATTATGAGACATTCTCAAGTGTTTGCTAGCAGAAGACAAGAAAAGCCTACCAGATGTGAATCCTAA 267 0.4307 MDKCRRKQEKTESSYSEEVSSIEWEFINMSEQEEDLIYRMYKLVGDRWSLIAGRLPGRKAEEIERFWIMRHSQVFASRRQEKPTRCES 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2565g00031 88 Gene3D - 29 88 - -
Pral2565g00031 88 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 28 74 - -
Pral2565g00031 88 CDD SANT 28 67 IPR001005 -
Pral2565g00031 88 SMART sant 25 73 IPR001005 -
Pral2565g00031 88 FunFam MYB-like transcription factor 28 70 - -
Pral2565g00031 88 Pfam Myb-like DNA-binding domain 29 68 IPR001005 -
Pral2565g00031 88 SUPERFAMILY Homeodomain-like 30 68 IPR009057 -
Pral2565g00031 88 ProSiteProfiles Myb-like domain profile. 30 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2565g00031 Pral-Chr2565 156154 158138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2565g00031 29 83 MYB Transcription Factor Family AT5G52600 56.364 1.00e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral2565g00031 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2565g00031 K09422 - qsu:112022944 148.673