Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2565g00030 ATGCTGCATGTAATTGCAGAGGTGAGCAGTATCGAGTGGGAGTTCATAAACATGTCAGAGGAGGAAGAAGATCTCATCCGCAGAATGTACAAACTCGTTGGAGACAGATGGGGTCTGATAGCTGGTAGAATCCCGGGTCGAAAAGCTGAAGAGATCGAGAGGTTTTGGATTATGAAGCATGCCCAAGTGTTTGCCAGCAGAAGAGAGAATCTTGGCTCATAA 222 0.464 MLHVIAEVSSIEWEFINMSEEEEDLIRRMYKLVGDRWGLIAGRIPGRKAEEIERFWIMKHAQVFASRRENLGS 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2565g00030 73 Pfam Myb-like DNA-binding domain 18 57 IPR001005 -
Pral2565g00030 73 Gene3D - 18 70 - -
Pral2565g00030 73 SUPERFAMILY Homeodomain-like 19 57 IPR009057 -
Pral2565g00030 73 CDD SANT 17 56 IPR001005 -
Pral2565g00030 73 FunFam MYB-like transcription factor 17 59 - -
Pral2565g00030 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 17 59 - -
Pral2565g00030 73 SMART sant 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2565g00030 Pral-Chr2565 143514 145760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2565g00030 17 70 MYB Transcription Factor Family AT5G52600 50.000 5.48e-14 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral2565g00030 Myb_DNA-binding 7.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2565g00030 K09422 - jre:108998963 121.709