Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2565g00029 ATGGACAAACAGCGAAGAAGGCAGCACGAGGCTACTGCCTCTGGGTCTGACTATGAAGAGGTGAGCAGTATCGAGTGGGAGTTCATAAACATGTCAGAGGAGGAAGAAGATCTCATCCGCAGAATGTACAAACTCGTTGGAGACAGATGGGGTCTGATAGCTGGTAGAATCCCGGGTCGAAAAGCTGAAGAGATCGAGAGGTTTTGGATTATGAAGCATGCCCAAGTGTTTGCCAGCAGAAGAGAGAATCTTGGCTCATAA 261 0.4828 MDKQRRRQHEATASGSDYEEVSSIEWEFINMSEEEEDLIRRMYKLVGDRWGLIAGRIPGRKAEEIERFWIMKHAQVFASRRENLGS 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2565g00029 86 SUPERFAMILY Homeodomain-like 32 70 IPR009057 -
Pral2565g00029 86 MobiDBLite consensus disorder prediction 1 20 - -
Pral2565g00029 86 CDD SANT 30 69 IPR001005 -
Pral2565g00029 86 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 30 72 - -
Pral2565g00029 86 FunFam MYB-like transcription factor 30 72 - -
Pral2565g00029 86 SMART sant 27 75 IPR001005 -
Pral2565g00029 86 Gene3D - 31 83 - -
Pral2565g00029 86 Pfam Myb-like DNA-binding domain 31 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2565g00029 Pral-Chr2565 143514 145853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2565g00029 30 83 MYB Transcription Factor Family AT5G52600 50.000 1.01e-13 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral2565g00029 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2565g00029 K09422 - aew:130782543 132.88