Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2565g00001 ATGAAAGAAACTAAGATAATCACGAACAAGTTTGTAAAATCGGAGTTTCTCAATGGAGCTCCGAGGATTGTTCGGATCAGTGTCACCGATCACTACGCGACTGACACCTCAAGCGGCGATGACGAAGATGAACGCTTCCAACCCAGAAGAACGAGGAGGCTCGTTAACGAAATCAGAATTGAGAAATGCTCCAATTTCTCAGCGAACAGCGAGGCTCATGGAGGAGGTACGAATACCTCTTCTTCCAAGCAGAGGTACAGGAACAACTCCGGTAAGGCCCTACCTGAAAAGTCCAACCAGGTCGAGCGGAAGGTCAAGAAGTACCGCGGTGTTCGACTGCGTCCCTGGGGCAGGTGGTCGGCGGAGATCAGAGATCCGACGAGTAGGCAAAGGCTGTGGCTGGGCACTTTCGACACGGCGGAAGAGGCTGCCATGTCGTACGACAGGGCAGCTATCCGTATTAAAGGTCCGAATGCCACCACAAATATTCTCCAACCACCGCTTGAAACTGCCGAACCCGTCGAGGAATCCGAATCAACCTCAATGAACAACACTGTCTTGATTAAAGAGCCTCGTGCCTCTTCCCCAACCTCTGTCCTGAGGTTTCAGCCTCTAGAAGAACCCAAAACAGAGCCCAGAGAAGCAGAAGCAGAGTCATATTTTCGAGACAGTAATTTATTGTTCTTAGATTCTCCATTTTCTACCCGATATTCAGAGTGTGAAGCCCCTCTCCCAATGTTCTTCGACCAGTTCACATCAAATGATAACTTAAATTTCAGAGACAGTCCATTCCATCTTGATCAAGATTTTGAATCCTGTAAATGGGACGTAGACAGCTACTTTCAAGAGCAAGACAGTGCTGAGAACTGGGTCTGA 876 0.4852 MKETKIITNKFVKSEFLNGAPRIVRISVTDHYATDTSSGDDEDERFQPRRTRRLVNEIRIEKCSNFSANSEAHGGGTNTSSSKQRYRNNSGKALPEKSNQVERKVKKYRGVRLRPWGRWSAEIRDPTSRQRLWLGTFDTAEEAAMSYDRAAIRIKGPNATTNILQPPLETAEPVEESESTSMNNTVLIKEPRASSPTSVLRFQPLEEPKTEPREAEAESYFRDSNLLFLDSPFSTRYSECEAPLPMFFDQFTSNDNLNFRDSPFHLDQDFESCKWDVDSYFQEQDSAENWV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2565g00001 291 PRINTS Ethylene responsive element binding protein signature 130 146 IPR001471 GO:0003700|GO:0006355
Pral2565g00001 291 PRINTS Ethylene responsive element binding protein signature 108 119 IPR001471 GO:0003700|GO:0006355
Pral2565g00001 291 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 21 225 - -
Pral2565g00001 291 SMART rav1_2 107 170 IPR001471 GO:0003700|GO:0006355
Pral2565g00001 291 FunFam Ethylene-responsive transcription factor 2 106 165 - -
Pral2565g00001 291 Gene3D AP2/ERF domain 106 164 IPR036955 GO:0003700|GO:0006355
Pral2565g00001 291 Pfam AP2 domain 107 156 IPR001471 GO:0003700|GO:0006355
Pral2565g00001 291 MobiDBLite consensus disorder prediction 66 99 - -
Pral2565g00001 291 CDD AP2 106 162 IPR001471 GO:0003700|GO:0006355
Pral2565g00001 291 ProSiteProfiles AP2/ERF domain profile. 107 164 IPR001471 GO:0003700|GO:0006355
Pral2565g00001 291 MobiDBLite consensus disorder prediction 66 96 - -
Pral2565g00001 291 SUPERFAMILY DNA-binding domain 107 163 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2565g00001 Pral-Chr2565 8092 9316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2565g00001 1 284 AP2-EREBP Transcription Factor Family AT2G46310 37.540 3.02e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral2565g00001 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2565g00001 - - pcin:129290903 481.87