Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2563g00002 ATGGAGAATTGCAGTGCTTTTACCGAGAGTCTGATGGCAGAAGACACTAAATTAAAAGACCTTTTCGATGAAATTAGAAGCTTAACAGAGTTGGGCAATCATAAAGACTATGAATATACAACACGTATGGACCATTTTGAGACTCACCTGGTTGAGATGAAGACTTTCTTGGCTGAGATATCAAGAGGGATGTTGAGCCTTAACCATGCACTTGCCATTCCAATGAAGCAGCCCAGTTCTGACTTTCTAATGGCTGCAAATCTCACCAATGGAGCGATAAGGAGGATGATGAGTGACTATTACTCTTGCGAGGACCTAAAGCCTATACTTCAAGTGATTGACTTGAAGTTGGTGCAGTTACAAGAGCATAACAACACAGAAAGGTATAAGCTTTTGCTATCAGATGGTTCCCATTATCAATAA 423 0.4043 MENCSAFTESLMAEDTKLKDLFDEIRSLTELGNHKDYEYTTRMDHFETHLVEMKTFLAEISRGMLSLNHALAIPMKQPSSDFLMAANLTNGAIRRMMSDYYSCEDLKPILQVIDLKLVQLQEHNNTERYKLLLSDGSHYQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2563g00002 140 Pfam Replication factor-A protein 1, N-terminal domain 88 139 IPR007199 GO:0003677|GO:0005634|GO:0006260
Pral2563g00002 140 SUPERFAMILY Nucleic acid-binding proteins 84 139 IPR012340 -
Pral2563g00002 140 Gene3D - 86 140 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2563g00002 Pral-Chr2563 65897 67947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2563g00002 84 137 Core DNA Replication Machinery Family AT5G45400 46.552 1.34e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2563g00002 K07466 - jre:109004017 69.707