Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2558g00017 ATGAAAGTTTCGGAACTCCAGGTTCAGCTTCATCACCCCCACCATCATCAGCTCCAGCAGCAGAAGCAGAACAAGCAGAACGAAACCGCCAAGATGTGTAGGAAGATCCAATTGGGTGTTGCCGACCACCTCTCCCCGCCCATCCCCTCCAACGCCGCCGACGACTGTCACAAGGAAGACGACGGCGAGGAATTCTTAGTCCCGCCTCTCAATTTCGCTATGGTGGATAACGGCATTTTCAGGTCCGGCTTCCCTGAGCCCGCCAATTTCTCCTTCCTGCAAACCCTCGGCCTTCGCTCCATCATATATCTATGTCCTGAGCCGTACCCGGAGGCTAACATGGAGTTTCTGAAATCAAATGGGATTAAGCTTTATCAGTTCGGTATCGAAGGTCGCAAGGAGCCTTTTGTAAACATCCCAGAGGACACAATCCGTGAAGCTCTGAAAGTTGTCCTTGATGTCAAAAACCATCCGGTCTTAATTCACTGTAAGCGGGGAAAGCACCGAACAGGTTGTCTCGTAGGATGCTTGAGAAAGCTGCAAAAATGGTGCTTATCATCGGTGTTTGATGAGTACCAGCGATTTGCAGCTGCCAAAGCGAGAGTTTCCGATCAGAGATTCATCGAGTTGTTTGACATTTCAAGCCTGAAGCATTTGCCCATGTCATTCTCATGCTCAAAGAGGTGA 687 0.4978 MKVSELQVQLHHPHHHQLQQQKQNKQNETAKMCRKIQLGVADHLSPPIPSNAADDCHKEDDGEEFLVPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLYQFGIEGRKEPFVNIPEDTIREALKVVLDVKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISSLKHLPMSFSCSKR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2558g00017 228 CDD PFA-DSP_Siw14 66 212 - -
Pral2558g00017 228 ProSitePatterns Tyrosine specific protein phosphatases active site. 161 171 IPR016130 GO:0016311|GO:0016791
Pral2558g00017 228 ProSiteProfiles Dual specificity protein phosphatase domain profile. 71 225 IPR020422 GO:0006470|GO:0008138
Pral2558g00017 228 FunFam probable tyrosine-protein phosphatase At1g05000 65 215 - -
Pral2558g00017 228 MobiDBLite consensus disorder prediction 1 29 - -
Pral2558g00017 228 PRINTS Plant and fungal dual specificity phosphatase signature 103 116 IPR020428 GO:0016791
Pral2558g00017 228 PRINTS Plant and fungal dual specificity phosphatase signature 122 136 IPR020428 GO:0016791
Pral2558g00017 228 PRINTS Plant and fungal dual specificity phosphatase signature 66 83 IPR020428 GO:0016791
Pral2558g00017 228 PRINTS Plant and fungal dual specificity phosphatase signature 139 153 IPR020428 GO:0016791
Pral2558g00017 228 PANTHER TYROSINE-PROTEIN PHOSPHATASE 32 218 - -
Pral2558g00017 228 Gene3D Protein tyrosine phosphatase superfamily 65 215 IPR029021 -
Pral2558g00017 228 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 66 213 IPR029021 -
Pral2558g00017 228 Pfam Tyrosine phosphatase family 66 218 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2558g00017 Pral-Chr2558 309735 313826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2558g00017 53 228 Protein tyrosine phosphatase (PTP) family AT4G03960 76.136 1.23e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2558g00017 K18045 - gmx:100799968 348.206