Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2558g00014 ATGGAGAAAGTTGCTCATACTGATCAAGCTGATGAGGTGCTAGCTTTGCATCCACCAATTTCCGATGTATCATGCAATGCAGAGCCCAAACAGGCTGTCCCCATTAAGTATTCTGTTGTCAATAGGCGTGGGTTTGGGACTATGGGGAAACAAATGCCATTGCTTGCCAATCATTTCCAGGTTTCTGTTGGCGTACCAGATGCTGTATTTTTCCAGTATAGTGTTTCTATTACTTCAGAAAATGGTATAGCTATTGAAAGCAAGGGCATTGGGAGAAAACTGATTGAGAAGCTTTACCAAAGCTACTCTTCTGAACTTGGTGGCAAAAGCTTTGCCTATGATGGAGGGAAAACTTTGTATACAGTAGGTGCTCTGCCACATCAAAAGCTTGAGTTCACGGTAGTACTTGAAGAATCATTAGCAAAATGCAGTAGTTCTGGTAGTCCTGGTGCTGATGGAAGCCTTAGTGTGGGAAATAAAAGGTCAAAGCATTATTTTAAGTCAAAGCTTTTCAATGTAAAGATGAATTTTGCTGCCAAAGTACCCCTGCGGTCCATTGCTTTTGCCCTGGAAGGAGTTGAGTCAGATTCTAATGCTCAGGATGCTTTGAGAGTGCTTAATACCATTCTGAGGCAACAAGCAGCTAGCATGAGGTGTCTTTTGGTAAGGCAATCATTCTTTCGCGATGACTTGAGGAATTTCACTGATGTTGGAGGTGGGGTAACGGGAGTTCAAGGTTTTCATTCCAGCTTTCATCCTACACAGGGTGGATTGTCTCTCAACATGGATGTGTCCACAACAATGATCTTAACCCCTGGACCTGTAATTAATTTTCTTCTATCCAACCAGAATGTGAGGGAACCCCGTTATATTGACTGGGCAAAGGCCAAGAGAATGCTTAAAAATTTAAGGGTGCGTGCTTCTCATCGCAACCAGGAATTTAGAATTATTGGCTTGAGTGAGAAACCATGTAATCAGCAAGTTTTCAGTATGAAGGTGAAAAATGGTGAGGGCAGTAATGGAGCGGAGACTGTGGATATCACTGTTTATGAGTATTTTGCTAAACACTGCGGCATAGAACTGACTTCTGCATATCTTCCTTGCCTTGATGTGGGGAAGCCAAAACGGCCCATCTATTTGCCCATGGAGCTTTGTTCGCTTATTCCCCTTCAACGTTATACAAAGGCATTATCTGCAATTCAGAGAGCTTCTTTAGTTGAAAAATCACGACAAAAGCCTCAAGATAGAATCAAAGCCATAACAGATGCTATGGCACATCATCACTATGATGATGATCCTGTTCTTGCGGAATGTGGCATTTCTATCCAGAAGCAATTTATACAAGTTGAAGGTCGAGTTCTTGAGACTCCAAAGTTGAAGGTTGGTAAGAATGATGAGTGCTTCCCTCGTAATGGACGGTGGAACTTTAATAACAAGACACTTCTACAACCAACTCGCATTGATATCTGGGCTGTGGTCAACTTTTCAGCTCGTTGTGATACTAGTTACATTTCAAGGGAGCTTATCAAATGTGGAATGAATAAAGGCATTCAAATTGAACGCCCATATACTTTAATAGAAGAAGATTCACAAATTAGAAGATCTAGCCCTGTTGCAAGGGTTGAAAAGATGTTTGAGCTGCTATATGCTAAGCTTCCCGAAGAACCAAACTTAATTCTTTGCGTCTTGCCAGAGAGGAAAAATTGTGACATTTATGGACCTTGGAAGAAGAAATGTCTGACTGAAGTTGGTGTTGTCTCACAATGCATTTCTCCCTTAAAGATCAATGATCAATACCTTACTAATGTACTTCTTAAAATAAATTCTAAGCTTGGAGGAATAAATTCTCTGTTGGCCATGGAGCATTCTGGGCGTATTCCTCTAATAAATGATGCTCCAACACTGATTTTAGGAATGGATGTCTCTCATGGTTCTCCTGGACGATCAGACATTCCATCAATAGCAGCGGTTGTTGGATCTAGACGTTGGCCATTAATTTCAAGGTATAGGGCCTCTGTGCGAACGCAATCATCTATGGCGGAGATGATTGACGCTCTATACAAGCCTCTGGAAGATGGGAAAGATGATGGCATGATCAGGGAACTGCTTTTAGATTTCTATCATTCCAGTAATGGACGAAAACCAACTCAAATTATTGTCTTCAGGGATGGAGTTAGTGAATCACAATTTAACCAGATTTTGAACATTGAGCTGGACCAGATAATTAAGGCCTATCAACATCTTGGAGACGTTGACGTTCCCAAGTTTACTGTAATTGTGGCACAAAAGAATCATCATACAAAGTTTTTTCATGCTAATGGTTCAGATAATGTCCCTCCTGGGACAGTCGTTGACACAAAAATTGTGCATCCACGGAATTATGACTTCTACTTGTGTTCGCATGCAGGGATGCTTGGAACTCCTAGGCCAGTACATTACCATGTGTTGCTAGATGAGATTGGTTTCTCAGCGGACGGCATACAAAACTTAATCCATTCGCTGTCTTATGTGTACCAGAGGAGTACAGCCGCGGTTTCAGTTGTGGCCCCCATATGCTATGCCCACCTTGCCGCAGCTCAGATGAGGCAATTTTTGAAATCTGATGATTCATCAGAGACATCTTCAACTTCCCCTGCTGAACTAGATGCTCCAATCTCAGAGCTTCCGAGGTTGCATCAGAATGTTCAGAGTAGCATGTTCTTCTGTTGA 2709 0.419 MEKVAHTDQADEVLALHPPISDVSCNAEPKQAVPIKYSVVNRRGFGTMGKQMPLLANHFQVSVGVPDAVFFQYSVSITSENGIAIESKGIGRKLIEKLYQSYSSELGGKSFAYDGGKTLYTVGALPHQKLEFTVVLEESLAKCSSSGSPGADGSLSVGNKRSKHYFKSKLFNVKMNFAAKVPLRSIAFALEGVESDSNAQDALRVLNTILRQQAASMRCLLVRQSFFRDDLRNFTDVGGGVTGVQGFHSSFHPTQGGLSLNMDVSTTMILTPGPVINFLLSNQNVREPRYIDWAKAKRMLKNLRVRASHRNQEFRIIGLSEKPCNQQVFSMKVKNGEGSNGAETVDITVYEYFAKHCGIELTSAYLPCLDVGKPKRPIYLPMELCSLIPLQRYTKALSAIQRASLVEKSRQKPQDRIKAITDAMAHHHYDDDPVLAECGISIQKQFIQVEGRVLETPKLKVGKNDECFPRNGRWNFNNKTLLQPTRIDIWAVVNFSARCDTSYISRELIKCGMNKGIQIERPYTLIEEDSQIRRSSPVARVEKMFELLYAKLPEEPNLILCVLPERKNCDIYGPWKKKCLTEVGVVSQCISPLKINDQYLTNVLLKINSKLGGINSLLAMEHSGRIPLINDAPTLILGMDVSHGSPGRSDIPSIAAVVGSRRWPLISRYRASVRTQSSMAEMIDALYKPLEDGKDDGMIRELLLDFYHSSNGRKPTQIIVFRDGVSESQFNQILNIELDQIIKAYQHLGDVDVPKFTVIVAQKNHHTKFFHANGSDNVPPGTVVDTKIVHPRNYDFYLCSHAGMLGTPRPVHYHVLLDEIGFSADGIQNLIHSLSYVYQRSTAAVSVVAPICYAHLAAAQMRQFLKSDDSSETSSTSPAELDAPISELPRLHQNVQSSMFFC 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2558g00014 902 Pfam PAZ domain 277 405 IPR003100 GO:0005515
Pral2558g00014 902 ProSiteProfiles PAZ domain profile. 297 389 IPR003100 GO:0005515
Pral2558g00014 902 SMART PAZ_2_a_3 267 411 IPR003100 GO:0005515
Pral2558g00014 902 CDD PAZ_argonaute_like 272 388 - -
Pral2558g00014 902 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 33 868 - -
Pral2558g00014 902 SUPERFAMILY PAZ domain 267 429 IPR036085 GO:0005515
Pral2558g00014 902 CDD Piwi_ago-like 433 865 IPR045246 -
Pral2558g00014 902 SMART DUF1785_2 220 272 IPR014811 -
Pral2558g00014 902 Pfam Piwi domain 558 866 IPR003165 GO:0003676
Pral2558g00014 902 SMART Piwi_a_2 558 866 IPR003165 GO:0003676
Pral2558g00014 902 FunFam Protein argonaute 7 267 393 - -
Pral2558g00014 902 Gene3D - 625 902 IPR036397 GO:0003676
Pral2558g00014 902 Pfam Argonaute linker 1 domain 222 269 IPR014811 -
Pral2558g00014 902 Gene3D paz domain 266 393 - -
Pral2558g00014 902 Pfam N-terminal domain of argonaute 50 210 IPR032474 -
Pral2558g00014 902 Gene3D - 453 619 - -
Pral2558g00014 902 Pfam Argonaute linker 2 domain 415 460 IPR032472 -
Pral2558g00014 902 SUPERFAMILY Ribonuclease H-like 546 864 IPR012337 -
Pral2558g00014 902 FunFam Protein argonaute 3 626 902 - -
Pral2558g00014 902 ProSiteProfiles Piwi domain profile. 558 866 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2558g00014 Pral-Chr2558 238698 247393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2558g00014 23 902 Eukaryotic Initiation Factors Gene Family AT5G43810 37.568 4.48e-177 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2558g00014 K11593 - qsu:111993396 1320.84