Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2556g00001 ATGGGTGGGTTGCAGACTTTGCAATACCTATCTTTGGCTCACAACAAATTGCAAGGGCATATACCTGAATCACTAAGTGGCATGATAAGTATTGAGTTAATAGATTTTTCCCATAATCATTTGTTTGGTGTGATTCCAAAGTCCTTAGAGTCATTGCACTATCTTAAATCTATTAATCTTTCCTACAATTTATTGGAAGGAGAGATTCCGAATGGTGGTCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGAAAATCCCAGCTACAAGTCCAACCATGCATTGTCTTTCTAAAGCATAATAGAGATGATGCTAACTATGCAACCAAAAGGGGTTTAACAAATTTGGACGCACCAACTAGGATATCCTATTATGAGCTTCTACAAGGAACAAATGGATTTGATGCGAGTAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATATAAAGCAATTCTTCCAAATAAAAAGATAGTTGCTGTCAAAGTATTTAACGCAGATATGGAAGAAGCATTGAGAAGTTTTGATATTGAATGCACTGCCATGTGCAATTTACACCACCGCAATCTCATTAGGATTATTAGTAGCTGCTCAAACGATGATTTCAAGTCTCTAATTATGGAATTCATGTCAAATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTACTGTTTAGATATCTTGCAGAGGTTAAACATAATGGTTGATGTGGCAAGTGCATTAGAGTACCTTCATCATGGTACTTCTATTCCGATTGTTCATTGTGACATAAAACCAAGCAATGTTTTGTTGGATGAAGACATGGTGGCTCATCTTAGCGATTTTGGTATAGCTAAATTATTAGGTGAAGGACAGTTGGAAACTTATACAAAAACATTAGCTACAGTTGGCTATGTGGCACCAGAGTATGGATCAAAAGGAGTGGTTTCTTTCAAAGGAGATGTGTATAGCTATGGTATCATGCTAATGGAAATGTTTACAAGGAAGAAGCCAACCGACAAAATGTTTGTTGAAGGTCTTTCTTTGAAAGATTGGGTTAGCAAATCAATACCGCATTCAATCATCAATATTTTAGATGTCAATTTGCTATGCAAAGGGAATCCAAATATTAGCAATATATTACAGCATATATCATCAATTTTTGAGTTAGCATTAAGTTGTTGCACTGAATCACCTGAAGCACGAGTTATGATGACTGATGTTGTGGTCTCATTGAAAAATATAAGTTTATATTCACATAAAACATTGGAGATGCGCCACTAG 1284 0.3551 MGGLQTLQYLSLAHNKLQGHIPESLSGMISIELIDFSHNHLFGVIPKSLESLHYLKSINLSYNLLEGEIPNGGPFQNFTAQSFMMNKDLCGKSQLQVQPCIVFLKHNRDDANYATKRGLTNLDAPTRISYYELLQGTNGFDASNLLGSGSFGSVYKAILPNKKIVAVKVFNADMEEALRSFDIECTAMCNLHHRNLIRIISSCSNDDFKSLIMEFMSNGSLDRWLYSHNYCLDILQRLNIMVDVASALEYLHHGTSIPIVHCDIKPSNVLLDEDMVAHLSDFGIAKLLGEGQLETYTKTLATVGYVAPEYGSKGVVSFKGDVYSYGIMLMEMFTRKKPTDKMFVEGLSLKDWVSKSIPHSIINILDVNLLCKGNPNISNILQHISSIFELALSCCTESPEARVMMTDVVVSLKNISLYSHKTLEMRH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2556g00001 427 Gene3D Phosphorylase Kinase; domain 1 122 215 - -
Pral2556g00001 427 Pfam Protein kinase domain 143 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2556g00001 427 PANTHER OS04G0122200 PROTEIN 4 416 - -
Pral2556g00001 427 SUPERFAMILY L domain-like 2 89 - -
Pral2556g00001 427 SMART serkin_6 140 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2556g00001 427 SUPERFAMILY Protein kinase-like (PK-like) 122 412 IPR011009 -
Pral2556g00001 427 Gene3D Transferase(Phosphotransferase) domain 1 216 425 - -
Pral2556g00001 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Pral2556g00001 427 Gene3D Ribonuclease Inhibitor 1 102 IPR032675 -
Pral2556g00001 427 FunFam Leucine-rich repeat receptor-like protein kinase 6 101 - -
Pral2556g00001 427 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Pral2556g00001 427 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 216 424 - -
Pral2556g00001 427 ProSiteProfiles Protein kinase domain profile. 140 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2556g00001 Pral-Chr2556 44371 45924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2556g00001 1 70 Receptor kinase-like Gene Family AT3G47570 38.571 3.87e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral2556g00001 Pkinase 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2556g00001 - K13420 pcin:129285519 620.157