Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2547g00003 ATGGCTCCTCATTTTGCTCTTCTTCCTCTTTCCACTTCCCCCCACCGCCACTTCTATCCTTCTTATTTCAAACCTCCCACCACGTCCTCAACACCCCGAGGATTCTCTGGATTTTCGGTCATCACCTCTTGCTCTTCTAATGGCAGAGACGCGGATGGCCTCAAGAGCGACGACCGCCTTCGTGAACAAAAACGACGAGCTGAGTTGTCCGCTCGCATTGCCTCCGGAGAATTTACGGTGCAGCAGTCTGGTTTCCCGTCTGTATTAAAGAAGAGTTTGTCAAAGTTGGGCATGCCCGAGGAGGTTCTGGATCTTTTATTCGGTAGAACGGATGGTCTTCGTGAAAACCCCATAATTCCCGAGGCGAAAGGATCAATCAAAGCCATTCGAAGTGAGGCCTTCTTCATTCCATTGTATGAACTTTACCTAACATACGGTGGAATTTTCAAACTGAACTTTGGGCCAAAGTCTTTTCTTATAGTATCTGATCCATCCATTGCAAAACACATTTTGAGAGACAATTCAAAGGCATATTCAAAGGGCATCTTGGCTGAGATCCTGGACTTTGTAATGGGAAAAGGGCTTATCCCTGCGGACGGGGAAATATGGCGTGTTAGACGACGTGCTATAGTCCCAGCATTGCATCTTAAGTATGTAACAGCTATGATTAACCTTTTTGGACAAGCTACAGAGAGACTCTGCAAGAAACTAGATGCTGCAGCATCTAATGGGGAGGATGTTGAGATGGAGTCACTTTTCTCTCGTTTGACTTTGGATATCATTGGCAAGGCCGTATTCAATTATGATTTTGATTCTTTAACGAATGACACGGGTATAGTTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATTCCTTTCTGGGAGATCCCCATATGGAAAGACATTTCACCACGTCAAAGGAAAGTTGCTTCAGCTCTCAAATTAGTCAATGACACGCTTGATGATCTGATATCAATTTGCAAGAGAATGGTTGATGAAGAAGATTTACAGTTTCATGAGGAGTACATGAATGAAAAAGACCCTAGTATTCTGCACTTCTTGTTAGCATCGGGAGATGATGTATCAAGTAAGCAACTTCGTGATGATTTAATGACGATGCTTATTGCTGGACACGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTAGCGAAGGAGCCTGTTATCATGTCCAAGCTTCAGGAAGAGGTTGACTCGGTACTTGGAGATCGATTTCCCTCTATTGATGACATGAAGAAACTCAAGTATACAACTCGAGTGATCAATGAGTCATTGAGGCTCTACCCACAACCACCTGTGCTAATTCGCCGGTCTCTTGAAAATGATGTTCTGGGAGGATATCCTATAAAAAGGGGTGAAGATATCTTTATCTCCGTTTGGAACTTACATCGGAGTCCAGAACTTTGGGAAGACTCGGATAAGTTTATTCCTGACAGATGGGCCTTAGATGGACCTAATCCTAATGAGACAAATCAAAACTTCAAATATCTTCCATTTGGTGGAGGACCACGAAAATGTGTTGGCGATATGTTTGCTTCATATGAGAATGTAGTTGCACTTGCAATGCTTGTCAGGCGGTTCAACTTCCACATGGCCCCTGGAGCTCCACCGGTTGAAATGACAACGGGGGCAACAATTCATACAACAGAAGGGCTGAAGATGACTGTAACACGCAGAATGAAACCTCCCATTGTGCCTTCCTTGCCAATGTCGAGTTTTGATGCGAATCCATCCTTAAGCATTTCGGATAAGGACGCAGTAAGTCAGAAAAGGTGA 1824 0.4391 MAPHFALLPLSTSPHRHFYPSYFKPPTTSSTPRGFSGFSVITSCSSNGRDADGLKSDDRLREQKRRAELSARIASGEFTVQQSGFPSVLKKSLSKLGMPEEVLDLLFGRTDGLRENPIIPEAKGSIKAIRSEAFFIPLYELYLTYGGIFKLNFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHLKYVTAMINLFGQATERLCKKLDAAASNGEDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPFWEIPIWKDISPRQRKVASALKLVNDTLDDLISICKRMVDEEDLQFHEEYMNEKDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLAKEPVIMSKLQEEVDSVLGDRFPSIDDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDVLGGYPIKRGEDIFISVWNLHRSPELWEDSDKFIPDRWALDGPNPNETNQNFKYLPFGGGPRKCVGDMFASYENVVALAMLVRRFNFHMAPGAPPVEMTTGATIHTTEGLKMTVTRRMKPPIVPSLPMSSFDANPSLSISDKDAVSQKR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2547g00003 607 Gene3D Cytochrome P450 116 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 Pfam Cytochrome P450 138 558 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 CDD CYP97 136 569 - -
Pral2547g00003 607 MobiDBLite consensus disorder prediction 583 607 - -
Pral2547g00003 607 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 515 524 IPR017972 GO:0005506|GO:0016705
Pral2547g00003 607 PRINTS E-class P450 group I signature 522 545 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS E-class P450 group I signature 392 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS E-class P450 group I signature 142 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS E-class P450 group I signature 372 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS E-class P450 group I signature 434 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS E-class P450 group I signature 474 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS E-class P450 group I signature 512 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 SUPERFAMILY Cytochrome P450 130 575 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS P450 superfamily signature 522 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS P450 superfamily signature 383 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS P450 superfamily signature 513 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2547g00003 607 FunFam Carotene epsilon-monooxygenase, chloroplastic 120 577 - -
Pral2547g00003 607 PANTHER CYTOCHROME P450 FAMILY 4 141 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2547g00003 Pral-Chr2547 23009 28419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2547g00003 52 592 Cytochrome P450 AT1G31800 80.407 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2547g00003 K15747 - qsu:112021689 972.615