Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2547g00002 ATGAATAGCCACCCTGGCTCTGCAACACGTTCAACAAATTCCACAATTTTTGATGTGAAGAACCAAAAGTCAGAAAACCCAGGCCAAATTGATCCGGCAAGTATAAAAGCGCAACCTTTTACTTTCCGTGAGTTGGCAACCGCAACAAAGAATTTTCGTCGTGGATGCCTGCTGGGTGAAGGCAGCTCTGGCAGAGTCTATAAGGGCACGCTTCCGGCGACCGGCCAGGTGGTAGCTGTGAAGCAACTCGACAAAAACGGGGTGCAAGGCAATAATAAGGAATTTCTGGTCGAGGTTTTGATGCTAAGTCTCTTGCATCACGAAAGTCTAGTCGACCTCATCGGTTATTGTGCCGATGGGGATCAACGTCTTTTGGTTTACGAATTTATCGCAGGGGGTTGCCTGGAAGAACACCTTCTCGAGAACGGACCAAATAAACGTCCATTGGATTGGATGACTAGGATGAAAATAGCGTATAATGCAGCGAGAGGATTGGAGTACTTGCACGACAAGGCTAACCCGCCGGTCATATATCGAGACTTGAAATCCTCAAATATATTGCTGGACGATGACTTTAACCCTAAACTCTCAGATTTTGGGTTGTTCAAGCTTGCCGGGGGACACAAGGCCAACCCCGCGCCTTCTATAGTTATGGGTACCTACGGATACTCGGCCCCAGAGTGCGTAACAACAGGTAACGTCACCTTGAAATCGGATGTGTACAGTTTTGGAGTTATTTTGCTGGAGCTCATTACTGGACGGAGAGCCATCGACACCACGAGACCAAACCACGAACAAAACCTAGTTTCGTGGGCAGTGCCCCTTTTCAAAGACCCAAAAAGATTTCCGGACATGGCGGATCCAGATCTGGAGAGGCATTTTCCAGAAAAGGACCTGAATCAAGCAGTGGCAATAGCAGCCATGTGCCTGCAGGAGGAAGCGGGAGCCCGTCCTTTGATGAGCGACGTCGTAACTGCTCTCAGTTTCCTTACTTTTTTGGATCAAGCTGGAGATAGTTGCGATGAGGAGGATGAAGAGGGGGACTAG 1047 0.4862 MNSHPGSATRSTNSTIFDVKNQKSENPGQIDPASIKAQPFTFRELATATKNFRRGCLLGEGSSGRVYKGTLPATGQVVAVKQLDKNGVQGNNKEFLVEVLMLSLLHHESLVDLIGYCADGDQRLLVYEFIAGGCLEEHLLENGPNKRPLDWMTRMKIAYNAARGLEYLHDKANPPVIYRDLKSSNILLDDDFNPKLSDFGLFKLAGGHKANPAPSIVMGTYGYSAPECVTTGNVTLKSDVYSFGVILLELITGRRAIDTTRPNHEQNLVSWAVPLFKDPKRFPDMADPDLERHFPEKDLNQAVAIAAMCLQEEAGARPLMSDVVTALSFLTFLDQAGDSCDEEDEEGD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2547g00002 348 ProSiteProfiles Protein kinase domain profile. 52 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2547g00002 348 Gene3D Phosphorylase Kinase; domain 1 20 129 - -
Pral2547g00002 348 FunFam Serine/threonine-protein kinase PBS1 130 345 - -
Pral2547g00002 348 MobiDBLite consensus disorder prediction 1 33 - -
Pral2547g00002 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Pral2547g00002 348 PANTHER OS07G0668900 PROTEIN 26 332 - -
Pral2547g00002 348 CDD STKc_IRAK 58 327 - -
Pral2547g00002 348 MobiDBLite consensus disorder prediction 1 31 - -
Pral2547g00002 348 SUPERFAMILY Protein kinase-like (PK-like) 29 330 IPR011009 -
Pral2547g00002 348 Gene3D Transferase(Phosphotransferase) domain 1 131 343 - -
Pral2547g00002 348 PIRSF ILK 11 335 - -
Pral2547g00002 348 FunFam probable serine/threonine-protein kinase RLCKVII 23 129 - -
Pral2547g00002 348 Pfam Protein kinase domain 56 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2547g00002 348 SMART serkin_6 52 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2547g00002 348 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2547g00002 Pral-Chr2547 12460 14525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2547g00002 34 330 Glycoside Hydrolase AT3G07070 72.391 4.55e-154 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral2547g00002 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2547g00002 - - qsa:O6P43_007722 485.337