Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2543g00006 ATGGAGGCTGTCCGATTGATCTCCATTACTACGATCAGAGCACGAAGCTGCCATAACAATGGCGGCTCAGCTGAACTAATCGATCTGAATCCATGGGATCTTCAATATCTAGTTCTTGGGTATGGTCAAAAGGGACTTCTCTTTCACAAACCCGCCTCTTTATCATCTTCAATACGCGGAGAAACAGTGATCCAACTTTTGAAGGACTCACTTTCTTCCACCCTCGACTTCTTCCGGCCGCTTGCTGGCCGTCTTCTTGTTGTCCCCCACGGTGGCGACGATGGCACATCCTCCGTCTTCATCACTTGTAACAACGCCGGAGTAAGCTTTGTTCATGGCATAGCAGACAACACTACAATTGCCGACATCCTCGAACCCACTTATGTTCCTCGGATTGTCTCCTCCTTCTTCCCACCAGGTAATATCCAGAACTTTGAAGCAACTCGGGTCCCATTAGTGGCTGTTCAAGTCACAGAGCTTGTGGATGGCATCTTCATCGCTTGTTCCATGAATCATTGTCTTGCTGATGTGAAGCCATACTGGAATTTCTTAAACGCATGGGCTCAGATCTCTCGAAATGGCCTAAACCACATGGCCCCAAATTCGAAGCTCGCTTCATTTGAACGGTGGTTTCCTCATGGTAATATTGAGCGCCCCATAACAATCCCATTCAGGAAAATATTGCAGCATCATCTTAAGGAGTCAACAGATTCGATCCAATCACCTCCATTTTCAAGGAGGATCTTTCACCTTCAAAAGCAAAAAATTGCTAAACTCAAAGCAAAAGCTAATTCAGAGGTACAAGATAGTATCATCAACAACAAAATCTCCTCTTTGCAAGCTGTTCTAGGCCATGTTTGGAGGTCTGTAATCAGAAATCAGAATCTTGACCCAAAAGAGGAAGTCACATACAGATTCCTCATATCTGCTAGATCCAAAGTCTCACACCCTCCAATTCCAGACGACTATTTTGGAATCACCGTGCAATTCACTACTGTGACGATGAAAGTAAGGGACTTAGTGGGAGATGGAGGCTTTGGAAAGTTTGTTTGGGAGATGAACAAGGAAATCTCATCATGCACTGAAGAAAAGATCAAGAGCGACTTTGAAGCCTGGGTACGAAATCCAACAATGCGTACCCAACGTGCCACAATTGGGAAGTTCATGACAACTAGCAGCTCCCCAAGAACCAACTTTTATGAGATCGATTTCGGTTGGGGAAGACCAGTGGCGGTTCGCGGCGGCGGAGCCAATGCGAAGCAGTGGAAGCTGGCGGTCGATGCCGGAGCAGAAGAAGGTAGCTTTGATGTTGAACTATGCGCCTCTTACGAAATACTGGAAGCTTTGGCTGGAGACCGTGAATTCATAGAAGCAGTGGATTTGCCATTGCCAGCGGAGCTAACGCCATCCAGTAAAGTAGCACGGACTCGACTATGA 1437 0.4649 MEAVRLISITTIRARSCHNNGGSAELIDLNPWDLQYLVLGYGQKGLLFHKPASLSSSIRGETVIQLLKDSLSSTLDFFRPLAGRLLVVPHGGDDGTSSVFITCNNAGVSFVHGIADNTTIADILEPTYVPRIVSSFFPPGNIQNFEATRVPLVAVQVTELVDGIFIACSMNHCLADVKPYWNFLNAWAQISRNGLNHMAPNSKLASFERWFPHGNIERPITIPFRKILQHHLKESTDSIQSPPFSRRIFHLQKQKIAKLKAKANSEVQDSIINNKISSLQAVLGHVWRSVIRNQNLDPKEEVTYRFLISARSKVSHPPIPDDYFGITVQFTTVTMKVRDLVGDGGFGKFVWEMNKEISSCTEEKIKSDFEAWVRNPTMRTQRATIGKFMTTSSSPRTNFYEIDFGWGRPVAVRGGGANAKQWKLAVDAGAEEGSFDVELCASYEILEALAGDREFIEAVDLPLPAELTPSSKVARTRL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2543g00006 478 Gene3D - 2 216 IPR023213 -
Pral2543g00006 478 Pfam Transferase family 28 454 - -
Pral2543g00006 478 Gene3D - 225 451 IPR023213 -
Pral2543g00006 478 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 20 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2543g00006 Pral-Chr2543 51092 52528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2543g00006 48 447 Monolignol Biosynthesis Gene Families AT5G48930 26.492 2.00e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2543g00006 - - pcin:129321848 595.89