Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2543g00005 ATGCATCCCATGGAGGCCGTTCGAACGATCTGCACAACTACGATCCGAGCACGAAGAGGCCTTAATCATGGCGACTCGCCTCAACAGATCGATCTGAATCCATGGGATCTTCAATTTCTACTACTTGAGTATGCTCAAAAGGGACTTCTCTTTCACAAACCCGCCTCGTTATCATCGTCAATACTTGGAGAAACAGTAATCCAGCAGTTGAAGGACTCGCTTTCTTCCACCCTCGACTTCTTCCTGCCGCTTGCTGGCCGTCTTCTTGTTGTCCCCCATGGCGGCGACGATGACACATCCTCCGTCTTCATCACTTGTAACAACGCCGGAGTAAGCTTTGTTCATGCTATAGCAGAGAACACTAAAATTGCCGCCATCCTTGAACCCACTTATGTTCCCACAATAGTCTCCTCCTTCTTCCCACCCGGTAATATCGAGAACTTTGAAGCAGATCGAGTTCCATTACTGGCTGTTCAAGTCACAGAGTTGGTGGATGGCATCTTCATCGCTTGTTCCATTAATCATTGTCTTGCTGATGTGAAGCCGTACTGGAATTTCTTAAATGCATGGGCTCAGATCTCTCGAAATGGCCTCAACCACATGGCCCCAAATTCGAAGCTGGCTTCATTTGAACGATGGTTTCCTCATGGTAATATTGAGCGCCCCATAACAATCCCATTCAGGAAAATATTGCAGCATCATCTTAAGGAGTCAACAGGTTTGATTCAGTCACCTCCATTTTCAGGGAGGATCTTTCACCTTCAAAAGCAAAAAATTGCTCAACTCAAAGCAAAAGCTAATTCAGAGGTACAAGATAGTATCATCAGCAACAAAATCTCCTCTTTGCAAGCTTTTCTGGGCCATGTCTGGAGGTCTGTAATCAGAAATCAGAATCTTGACCCAGAAGAGGAAGTCACATACAGATTCCTCATATCTGCTAGATCCAAAGTTTCGCACCCCCCAATTCCAGACGACTATTTTGGAATCACCGTGCAATTCACTGCTGTGACGATGAAAGTAAGGGATTTAGTGGGAGATGGAGGCTTTGGAAAGTTTGTTTGGGAGATGAACAAGGAAATCTCATCGTGCACTGAAGAAAAGATCAAGAGCGACTTCGAAGCTTGGATACGAAATCCAGCAATGCGTACACAGCATGCCACAATTGGGAAGTTTATGACAACTAGCAGCTCCCCACGAACCAACTTTTATGAGATCGATTTCGGTTGGGGAAGACCAGTGGCGGTTCGCGGCGGCGGAGCCAATGCGAAGCAGTGGAAGATAGCAGTCGATGCCGGAGCAGAAGAAGGTAGCTTTGATGTTGAACTATGGGCCTCTTACCAAATACTGGAAGCTTTGGCTAGAGACCGTGAATTCATGGAAGCAGTGGAACTGCCCTTGGCAGCGGAGCTAACGCCATCCAGTAAAGTAGCACGGACTCGACTATGA 1446 0.4675 MHPMEAVRTICTTTIRARRGLNHGDSPQQIDLNPWDLQFLLLEYAQKGLLFHKPASLSSSILGETVIQQLKDSLSSTLDFFLPLAGRLLVVPHGGDDDTSSVFITCNNAGVSFVHAIAENTKIAAILEPTYVPTIVSSFFPPGNIENFEADRVPLLAVQVTELVDGIFIACSINHCLADVKPYWNFLNAWAQISRNGLNHMAPNSKLASFERWFPHGNIERPITIPFRKILQHHLKESTGLIQSPPFSGRIFHLQKQKIAQLKAKANSEVQDSIISNKISSLQAFLGHVWRSVIRNQNLDPEEEVTYRFLISARSKVSHPPIPDDYFGITVQFTAVTMKVRDLVGDGGFGKFVWEMNKEISSCTEEKIKSDFEAWIRNPAMRTQHATIGKFMTTSSSPRTNFYEIDFGWGRPVAVRGGGANAKQWKIAVDAGAEEGSFDVELWASYQILEALARDREFMEAVELPLAAELTPSSKVARTRL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2543g00005 481 Gene3D - 231 454 IPR023213 -
Pral2543g00005 481 Gene3D - 5 219 IPR023213 -
Pral2543g00005 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 27 460 - -
Pral2543g00005 481 Pfam Transferase family 28 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2543g00005 Pral-Chr2543 38910 40355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2543g00005 68 442 Monolignol Biosynthesis Gene Families AT5G48930 26.598 3.27e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2543g00005 - - pcin:129321848 600.127