Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2543g00003 ATGGAAGCCATTCGAGTGATCTCCGCAACTACAGTTCAAGCTCGAGGCCATGTTAATAATGGCGACTCACCACAGCTAATCGACCTGAATCCATGGGATCTTCAGTATCTAATGCTTGAGCATGCTCAAAAGGGACTTCTTTATCCTAAACCCACCTCATCATCACCGTTCGAACGCGAAGAGACACTGATCCAGCACTTGAAGGATTCCCTTTCTTCGGCCCTCGACCTCTACCCACCCCTCGCCGGCCGTCTTGCCATCATACCCAACGATGACGACGACGACACCTCCTCCGTCTTCATCACTTGCAACAATGCCGGAGTAAGCTTCATTCATGCCATTGCAGAGAATACTACAGTTGCAGATATTGTTGGGCCTACTTATGTTCCTCAGGTTCTCTACTCCTTTTTTCCAACCGGAAATTTGAAGAATTTTGAAGGAACTCAGTTCCCATTAATGGTGGTTCAAGTCACGGAGCTAGTGGATGGCATCTTCGTTGCTGCCTCGACAAACCATTGTCTTGCTGATGTGAAGCCAGGTTGGGATTTCTGGAATGCATGGGCAGGATTCTCCAAAAACGGTTTGAATCATATAGGGTTGGATTCAAAGCTCGCCACATTCGATCGATGGTTTCCTCATGGTCATATTAAACGGCCCTTGCGAATTCCATTTAAAGAAATGATGGAAAATTATCATAAGGCGTCCACTGATTTGGTTCAACCACCCCCATTCTCTAGGAGGATCTTTCACTTTAAGAGGGAGAAAATTGCTGAACTCAAAGCAAAAGCCAACTCAGAAGTAGAGGAAGGAGTCATCAGCAACAAAATCTCATCCTTGCAAGCTGTTCTTGGACATGTTTGGAGGTCTGCAATCAGAAATCAGAATCTTGATCCAGAAGAGGAAGTCTCTTACAGATTCCTCATATCTGCTAGATCCAGAGTTTCTCACCCGCCAATTCCAGATGATTATTTTGGAATCACCGTGCAATTCACTACTGTGACGATGAAAGTAAGGGACTTGGTGGGAGATGGAGGCCTTGGAAAGTTTGCTTCAGAGATGAACAAGGCCATCTCGTCATGCACAGAAGAGAAGATCAAGAGTGACTTTGAAGCCTGGGTACGACATCCAACAATGCGTACGCAGCGTGCCCCAATAATTGGGAAGTTTATGTCAACCAGCAGTTCCCCGAGAACCAACTTTTATGAGATCGATTTCGGGTGGGGAAAGCCGGTGGCCGTTCGCCTCGGCCCTGCCAATACAAAGTGTTGGAAGTTAGCGGCAGATGCCGGAGCCGAAGAAGGAAGTTTCGACTTTGAGATGTGTGCTTCCTATGAGATACTGGAAGCCATGGGGAAGGACCCTGAGTTCATGCATATGGTGTCGCTGCCACCTCCACCATCCATGGCGGTTATCCAATGA 1419 0.4722 MEAIRVISATTVQARGHVNNGDSPQLIDLNPWDLQYLMLEHAQKGLLYPKPTSSSPFEREETLIQHLKDSLSSALDLYPPLAGRLAIIPNDDDDDTSSVFITCNNAGVSFIHAIAENTTVADIVGPTYVPQVLYSFFPTGNLKNFEGTQFPLMVVQVTELVDGIFVAASTNHCLADVKPGWDFWNAWAGFSKNGLNHIGLDSKLATFDRWFPHGHIKRPLRIPFKEMMENYHKASTDLVQPPPFSRRIFHFKREKIAELKAKANSEVEEGVISNKISSLQAVLGHVWRSAIRNQNLDPEEEVSYRFLISARSRVSHPPIPDDYFGITVQFTTVTMKVRDLVGDGGLGKFASEMNKAISSCTEEKIKSDFEAWVRHPTMRTQRAPIIGKFMSTSSSPRTNFYEIDFGWGKPVAVRLGPANTKCWKLAADAGAEEGSFDFEMCASYEILEAMGKDPEFMHMVSLPPPPSMAVIQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2543g00003 472 Gene3D - 4 222 IPR023213 -
Pral2543g00003 472 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 457 - -
Pral2543g00003 472 Pfam Transferase family 26 457 - -
Pral2543g00003 472 Gene3D - 225 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2543g00003 Pral-Chr2543 19153 20571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2543g00003 50 452 Monolignol Biosynthesis Gene Families AT5G48930 27.739 1.13e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2543g00003 - - pcin:129321848 602.053