Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2543g00002 ATGGCAGCGATCAGAGTGATCTCTAATACTACAATCCAAGCTCGAAGCCAAGTTAATAATGGCGACTCACCTGAGCAAATCGAGCTCAATCCATGGGACCTTCGTTTTCTACTTCTCGAGGGTGGTCAAAAGGGGCTTCTTTTCCACAAACCCACCATGCCATTACCACTAGTGATCCAGCATCTTAAAGAAACGTTTTCTTCCACCCTCGACTTCTTCGTGCCCCTCGCCGGCCGTCTTGCGGTCGTCCCACATGGTGGTGATGACGGCACCTCTTCCGTCTTTGTTAGTTGCAACAATGCAGGAGCAAGCTTTGTTCATGCTATCGCAGAGAACACTACAATTGACGACATCCTCGAACCCACTTATGTTCCTCCAATTGTTGAGTCCTTCTTCCCACTTGGAAAATCTAAGAACTTTGAAGGAACTCATGTACCATTAATGGCGGTTCAAGTTACAGAGCTTGTGGATGGCATCTTCATTGCTTTCTCAGTGAACCATTGTGTTAGTGAGGCGAAGCCGGCCTTGGATTTCATGAATACATGGGCTCAGATTAGCCGAAATGGTTTGAACCCCATAGAGTCAAATTTGAAGCTCGCTTCGTTTGAACGATGGTTTCCCCATGGTAACATTGAACGTCCTATACGAATACCTTTGAGAGATATAATGGAGAAATATGCTGATGAATATGCTAGCTCTCTTCACCCACCTCCAATTTCTAAGAGGATCTTTCACTTCAAAAGGGAAAATATTACTGAACTCAAAGCAAAAGCTAACTCAGAAGTAGAAGATGGTATTCTAAGCAACAAAATCTCCTCTCTGCAAGCTGTTATCAGCCATGTTTGGAGGTATGCAATCAAAAATCTACGTCTTGATCCCGAAGAAGAAGTGCATTACAGCATCCTCATAACTGCCAGACCTAGAATTTCAAACCCACCTATTCCAGACAACTATTTTGGCAACACAGTGCAATTTGCTACCGTGACGATGAAAGTAAGGGACTTGGTGGGAGTGGGAGGTCTTGGGAAGTTTGCTTTGGAGATGAACAAGGTGATCTCATCATACACAGAAGAAAAGATCAAGAGCGACTTTGAAGCTTTGATCCCAAATCCAACCATCAGTTTACAAAGTGGCAACTTTGGGAAGGTAATGCATACTGGTGGCAGCCAAAGATCCAACTTTTACACTATTGACTTCGGCTGGGGAAGGCCTTTGGCGCTTCGTCGAGGTCCAGCCTTTATGTATGATTGGGACTTAGTAGTTGATGCTGGAGCAGAAGAAGATAGCTTTGATATTGAGCTTTGTATCTCCTATGAAATATTAGAACTTATGGGAAGGGATCCCGAGTTCATGCATGCGGTGTCGTCTCCGCCGCCCCCGCCGCCTCCTCCTCCTCCGCCATTGCCAACAGGTCGACTGTGA 1422 0.4543 MAAIRVISNTTIQARSQVNNGDSPEQIELNPWDLRFLLLEGGQKGLLFHKPTMPLPLVIQHLKETFSSTLDFFVPLAGRLAVVPHGGDDGTSSVFVSCNNAGASFVHAIAENTTIDDILEPTYVPPIVESFFPLGKSKNFEGTHVPLMAVQVTELVDGIFIAFSVNHCVSEAKPALDFMNTWAQISRNGLNPIESNLKLASFERWFPHGNIERPIRIPLRDIMEKYADEYASSLHPPPISKRIFHFKRENITELKAKANSEVEDGILSNKISSLQAVISHVWRYAIKNLRLDPEEEVHYSILITARPRISNPPIPDNYFGNTVQFATVTMKVRDLVGVGGLGKFALEMNKVISSYTEEKIKSDFEALIPNPTISLQSGNFGKVMHTGGSQRSNFYTIDFGWGRPLALRRGPAFMYDWDLVVDAGAEEDSFDIELCISYEILELMGRDPEFMHAVSSPPPPPPPPPPPLPTGRL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2543g00002 473 Gene3D - 221 444 IPR023213 -
Pral2543g00002 473 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 451 - -
Pral2543g00002 473 Pfam Transferase family 4 450 - -
Pral2543g00002 473 MobiDBLite consensus disorder prediction 453 473 - -
Pral2543g00002 473 Gene3D - 2 211 IPR023213 -
Pral2543g00002 473 MobiDBLite consensus disorder prediction 451 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2543g00002 Pral-Chr2543 4834 6255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2543g00002 60 444 Monolignol Biosynthesis Gene Families AT5G48930 26.914 5.85e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2543g00002 - - pcin:129321848 588.956