Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2543g00001 ATGGCGGCAGGTTTTCGAGTGATCTCAACAACTACAATCCAAGCAGGAAGATGCGTTAATCATGAAGATCCACCCAAAAAAATCGACCTCAATCCATGGGGTCTTCGGTTTCTGCTCTATGATTATGCTCAAAAGGGTGTTCTTTTCCACAAACCTCCCATATTATCACCGTCAAACCACACACGGACACTGATACAGCACCTTAAGGACTCGTTTTCTTCAACCCTTGACTTCTTCTTGCCCCTCGCCGGCCGCCTTGCCATCGTCCGCCACGGCGATGATGGCACCTCCTCCGTCTTCATCACTTGCAACAATGCCGGAGCAAGCTTTGTTCATGCTATTGCCGAGAACACGACGATTGCTGACATTCTTGAACCCGTTTATGTTCCTCCGGTTGTCCAATCCTTCTTCCCACAAAGTAATTCCAAAACCTTCGAAGGGACTCGGATCCCATTACTGGCTGCTCAAGTTACAGAGCTTGTGGATGGCATCTTCATTGCTTGCTCAATAAACCATTGTATTGCTGATATGAAGACGGTATTGTTTTTCTTGAATACGTGGGCTAAGATCTCCCGAGATGGTTTAAACCTCATGGATTCAAAATCGAATGGTTTAAACCACATAGATTCAAATTCTAATGTCGCTTCATTCGAACAATGGTTTCCTCATGGGAATATCAAACGACCTTTAAGAATCCCATTCAGGGAAGCAATGGAGAATTATAGTAAGCAGTACACTCAGCCACCTCCATTCCCCAAGAGGATCTTCCACTTCAAAAGGGAAAAAATCGCTGAACTCAAAGCTAAAGCTAAATCAGAGGTCGAGGATGGTGTCATCAAGAACAGAATCTCTTCGCTACAGGCTGTTATCGGCCATATTTGGGGGTCTGTGATCAGAAACCAGCATCTTGATCCAGAGGAAGACGTAACTTACAGATTCGTTGCGACTTCGGAATCGAGAGTCTCTCACCCACCAATACCAGACAACTACGTCGGGAACACTGTGCAATTCACGCGTCTGACGATGAAAGTAAGGGATCTGTTGGGAGATGGAGGACATGGGAAGTTTGTTTCGCAGATGAACAAGATCGTCTCATCATACACACAAGAAAAGATCAAGAGGGAGTTTGAAGATTGGGTACAAAATCCAACAATAAGTTTTCAGAGTGGCACAATGGGAATGTTTTGGCAACCGGAAGCTCCACCAGGACCAACTTCTACACGGTTTATTTCGGCTGGGGACGGCCGGCGGTGGTTCGAAGCAGCATCGCCAATACAAATGTATGGAAGCTGA 1293 0.4586 MAAGFRVISTTTIQAGRCVNHEDPPKKIDLNPWGLRFLLYDYAQKGVLFHKPPILSPSNHTRTLIQHLKDSFSSTLDFFLPLAGRLAIVRHGDDGTSSVFITCNNAGASFVHAIAENTTIADILEPVYVPPVVQSFFPQSNSKTFEGTRIPLLAAQVTELVDGIFIACSINHCIADMKTVLFFLNTWAKISRDGLNLMDSKSNGLNHIDSNSNVASFEQWFPHGNIKRPLRIPFREAMENYSKQYTQPPPFPKRIFHFKREKIAELKAKAKSEVEDGVIKNRISSLQAVIGHIWGSVIRNQHLDPEEDVTYRFVATSESRVSHPPIPDNYVGNTVQFTRLTMKVRDLLGDGGHGKFVSQMNKIVSSYTQEKIKREFEDWVQNPTISFQSGTMGMFWQPEAPPGPTSTRFISAGDGRRWFEAASPIQMYGS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2543g00001 430 Gene3D - 235 414 IPR023213 -
Pral2543g00001 430 Gene3D - 5 219 IPR023213 -
Pral2543g00001 430 Pfam Transferase family 38 385 - -
Pral2543g00001 430 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2543g00001 Pral-Chr2543 588 1880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2543g00001 66 348 Monolignol Biosynthesis Gene Families AT5G48930 29.514 2.12e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2543g00001 - - pcin:129321848 484.567