Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2542g00012 ATGGCAGCACGCACTACTTCCTCCATTGAAAGATCAAGCACCAAGCAGCTCAATAACATCGGTTTGTCTGGACCATTGCCATCATCCTTGTCAGTTCTTCCGACTCCGATAGGAGAGACATTTGCCAAGTTTTCTGATTCTCAGCCGGCTGTCATGGCAAAAGAGCTTATGACTGGGCCTATAACTCAGCCGAGTCATTTAAATTCCAGCGGAGCAATTGGGCACATATTTTCATCTTCTCCTGGATATTCAACTGATCTTCATCACTCAGCTCTTTTGCCGCATGAAAAGCACTCAACAAATGCTCATTTCATTTCTCAGTCATCCAACATGGCTTCGTTGCCCTTTTCTTATTCTTCCAATAGTGGACCGCTTCCTTCTTCAACACCAAATAGTTATTTCAAAGAAAACGGTGCTTCCTGGAATATAGAACCCCTGTCCAACTTTCTTGATTTTCCTGTGAATACTACCATTGAGAATAGTCCAGCAGAAAACAGTGCCTCCACTGTCATGGCATCTGAGGAGTATTGTAAGCGAAATGAATGGCAAGAGTGGGCTGATCAGCTTATAAGTGAAGACGATCCTTTGACTTCTAATTGGAATGACCTTCTTACTGACAACATTCAAGATCTTGAGCCAAAGGTGGGATGCCAGGTTTCACATGTTCCAGGAAACCAGTCCCAAGGTCAGCAGCTACTTCCAGCTTCATCTGGAGACAATTGCTTTGGTGCTCCCCCTGCTTCATCAGGAAGTTCTGCTCCCGCCAAGCCACGGATGCGATGGACACCAGAGCTTCATGAGGCTTTTGTGGAGGCTGTCAACAAACTTGGTGGCAGTGAAAGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACGATATATCATGTTAAAAGTCACTTGCAGAAATACAGGACTGCTAGATATAGACCGGAACCATCTGAAGGATCCTCAGAGAAACGACTGACCATTGAGGACATGCCTCCTCTAGACCTGAAAACTGGTATTGAGATCACTGAAGCCCTGCGACTGCAGATGGAGGTTCAGAAGCGGCTGCATGAGCAACTTGAGATTCAACGAAACCTACAACTGCGAATAGAAGAACAAGGAAGGTACCTTCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGCTGACAAGAAGGCATCGCCGGTATCTGCGACAGAGAAGCCATCAGGAGTGTCTTCAGACGCTATCAAAGATTGTGCTGCCAAAGGTGATGTGGAAGCCTCCCAAGTGGAGGGTGATTGCAAGTCGGGACATGATCAAGCCAATAACAGTACTGCAGTTGAGGAAAGGTCTCTGGAAGTGGGTATGAAGAATGATGGCCCTCAAAATCAAGCTTCTGATAATCCTAAGCAACAAGCCGGTGAAGAGAGTGCTCCAGCCTCGAAGAGGCAGAGAACAGACGAGTAA 1449 0.4624 MAARTTSSIERSSTKQLNNIGLSGPLPSSLSVLPTPIGETFAKFSDSQPAVMAKELMTGPITQPSHLNSSGAIGHIFSSSPGYSTDLHHSALLPHEKHSTNAHFISQSSNMASLPFSYSSNSGPLPSSTPNSYFKENGASWNIEPLSNFLDFPVNTTIENSPAENSASTVMASEEYCKRNEWQEWADQLISEDDPLTSNWNDLLTDNIQDLEPKVGCQVSHVPGNQSQGQQLLPASSGDNCFGAPPASSGSSAPAKPRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPEPSEGSSEKRLTIEDMPPLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGADKKASPVSATEKPSGVSSDAIKDCAAKGDVEASQVEGDCKSGHDQANNSTAVEERSLEVGMKNDGPQNQASDNPKQQAGEESAPASKRQRTDE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2542g00012 482 MobiDBLite consensus disorder prediction 387 482 - -
Pral2542g00012 482 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 247 470 IPR044848 GO:0003700
Pral2542g00012 482 SUPERFAMILY Homeodomain-like 254 310 IPR009057 -
Pral2542g00012 482 Coils Coil 343 363 - -
Pral2542g00012 482 Pfam MYB-CC type transfactor, LHEQLE motif 340 387 IPR025756 -
Pral2542g00012 482 Gene3D - 255 314 - -
Pral2542g00012 482 MobiDBLite consensus disorder prediction 220 258 - -
Pral2542g00012 482 Pfam Myb-like DNA-binding domain 258 309 IPR001005 -
Pral2542g00012 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 253 313 IPR017930 -
Pral2542g00012 482 MobiDBLite consensus disorder prediction 1 21 - -
Pral2542g00012 482 MobiDBLite consensus disorder prediction 429 443 - -
Pral2542g00012 482 FunFam Myb family transcription factor 255 313 - -
Pral2542g00012 482 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 310 IPR006447 GO:0003677
Pral2542g00012 482 MobiDBLite consensus disorder prediction 220 247 - -
Pral2542g00012 482 MobiDBLite consensus disorder prediction 451 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2542g00012 Pral-Chr2542 48646 53698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2542g00012 9 397 G2-like Transcription Factor Family AT4G28610 48.635 3.44e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral2542g00012 Myb_DNA-binding 4.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2542g00012 - - gmx:100810560 635.95