Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2541g00006 ATGAGCTCCTCACCACAGGCTATCACTTGCAAAGGTGCCGTATGTTGGGCAATAGGAGAGGGAGTGAAGGAGGAGGAGATAGAAGTAGAGCCTCCAAAAGCTTCAGAAGTTCGAGTTAAGATGCTTTGTGCTAGTGTTTGCCGTTCAGACATCTTTTCCACTCAAGGACTCCCACATGCCAATTATCCTCAAGTTCTAGGCCATGAAGGAATTGGTGTTGTGGAGAGCAAAGGGGAGGAAGTGAAGAATGTGAAGGTAGGGGATATGGTGATTCCACTGTACCTATCAGAGTGTGGAGAATGTGAGGTTTGCATAAAAGGGAAGACCAACTTATGCATGAGATACCCTATAAGGTTGAATGGGTTGATGGCAGACAACACTTCTAGAATGTCTGTGAGAGGTCAAAAGGCATATCATCTCATGAGTTGTGCCACATGGTGTGAGTATATGGTCATTGATGCTAACTATGTTCTTAAAGTTGAATCATCAGCCATTGATGCAGCTCATGGCAGCTTCATCTCTTGTGGTTTCTCTACTGGTTTTGGGGCTGCCTGGAAAGAAGCCATGGTTGAAGAAGGATCCAGTGTTGCTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGCTGTAAGTGCAGCAAAATTGATGGGGGCAACGAAGATAATTGGGATCGACAAAAATGAGAAGAAGAGAGAAAAGGGAGAAGCTTTTGGAATGACACACTTCATAAATCCTGACAAGTTATCAGATAAACCTCTTTCAGAGGAAGTCAAAGAACTAAGTGGTGAAATAGGGGGAGTGGATTATTCTATTGAATGCACGGGAGTTCCCTCTTTGCTCAACGAAGCCATGGAATCTACTAAAGTGGGAGTGGGCAAAACTGTAGTGGTTGGTGCAGGAGCTGAATCTGTGCAGTTGAGTTATGGCACCATTCTTTATGGAAGAACATTGAAAGGTTCTGTATTTGGAGGAATAAAGCCCATCCCTGATCTTCCTTTTATAGCTCACAAGTGTCACACAAAGGAAATTCCAATTCATGAACTTTTAACCCATGAGATCCACTTGGAAGATATAAGCAAAGCATTTGGGCTAATGAGACATCCAGATTGCGTCAAAGTTGTGATCAAGATATGA 1131 0.4341 MSSSPQAITCKGAVCWAIGEGVKEEEIEVEPPKASEVRVKMLCASVCRSDIFSTQGLPHANYPQVLGHEGIGVVESKGEEVKNVKVGDMVIPLYLSECGECEVCIKGKTNLCMRYPIRLNGLMADNTSRMSVRGQKAYHLMSCATWCEYMVIDANYVLKVESSAIDAAHGSFISCGFSTGFGAAWKEAMVEEGSSVAVFGLGAVGLGAVSAAKLMGATKIIGIDKNEKKREKGEAFGMTHFINPDKLSDKPLSEEVKELSGEIGGVDYSIECTGVPSLLNEAMESTKVGVGKTVVVGAGAESVQLSYGTILYGRTLKGSVFGGIKPIPDLPFIAHKCHTKEIPIHELLTHEIHLEDISKAFGLMRHPDCVKVVIKI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2541g00006 376 PANTHER ALCOHOL DEHYDROGENASE 6 368 - -
Pral2541g00006 376 Gene3D - 180 319 - -
Pral2541g00006 376 Gene3D - 14 371 - -
Pral2541g00006 376 FunFam alcohol dehydrogenase 1-like isoform X1 18 179 - -
Pral2541g00006 376 Pfam Zinc-binding dehydrogenase 203 324 IPR013149 -
Pral2541g00006 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Pral2541g00006 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 319 - -
Pral2541g00006 376 SUPERFAMILY GroES-like 5 165 IPR011032 -
Pral2541g00006 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 335 IPR036291 -
Pral2541g00006 376 Pfam Alcohol dehydrogenase GroES-like domain 35 160 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2541g00006 Pral-Chr2541 32874 37536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2541g00006 36 336 Monolignol Biosynthesis Gene Families AT4G37990 27.124 5.36e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2541g00006 K00121 - gmx:100798341 464.536