Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral253g00002 ATGGCAGGTGCTGCAACATCTGGTGCTGTGTTGAATGGGTTGGGATCTTCCTTCTTGTGCGGAGGAAAGAGAAGCCAATCTCTTTTCTCTGCTAAATCTAACGGTGCTGCTAACAATGCCGTTGGCCCTAAGAAGTTCTTTGTAGCTGCTGCTGCTATTCAACCCAAGAAATCTTGGATCCCCGCTGTTAAAGGCGGTGGCAACTTCATCGACCCCGAATGGCTAGATGGCTCGCTCCCAGGTGACTATGGCTTTGACCCTCTTGGCCTGGGCAAGGATCCAGCATTTCTGAAGTGGTACAGAGAAGCAGAGCTCATCCATGGCCGGTGGGCGATGGCGGCGGTCGTCGGAATCTTTGTTGGCCAGGCATGGAGCGGAGTTCCCTGGTTCGAGGCCGGTGCTGACCCTTCTGCCATTGCTCCTTTCTCCTTTGGCTCACTTCTGGGCACACAGTTGCTGCTTATGGGGTGGGTAGAGAGCAAGAGGTGGGTGGACTTCTTCAATCCTGATTCACAATCAGTGGAGTGGGCCACGCCGTGGTCGAGAACAGCCGAGAACTTTGCCAACGCCACCGGCGACCAGGGATACCCTGGAGGCAAATTCTTCGACCCATTGGGGTTTGCAGGCAAAATCAAGGATGGGATTTACATTCCTGACAGAGAAAAGCTGGAAAGACTCAAACTTGCTGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTCATTTTCTACTTTGAAGCTGGACAAGGGAAAACACCCCTTGGTGCTCTTGGCTTGTAA 783 0.5249 MAGAATSGAVLNGLGSSFLCGGKRSQSLFSAKSNGAANNAVGPKKFFVAAAAIQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGDQGYPGGKFFDPLGFAGKIKDGIYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral253g00002 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 56 258 IPR001344 GO:0009765|GO:0016020
Pral253g00002 260 FunFam Chlorophyll a-b binding protein, chloroplastic 72 259 - -
Pral253g00002 260 Gene3D Chlorophyll a/b binding protein domain 72 259 - -
Pral253g00002 260 Pfam Chlorophyll A-B binding protein 72 248 IPR022796 -
Pral253g00002 260 SUPERFAMILY Chlorophyll a-b binding protein 69 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral253g00002 Pral-Chr253 20452 21822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral253g00002 5 260 Chloroplast and Mitochondria Gene Families AT1G15820 84.375 1.27e-155 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral253g00002 K08917 - cave:132178531 475.322