Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2538g00015 ATGTTATGCGCTGCAGTAGCATGGGAAGCAGGGAAACCATTGGTGATGGAACGAGTGGAAGTAGCTCCACCACAGGCGATGGAAGTGAGGATCAAGGTCAAATACACGTCTCTCTGCCACACTGATCTCTACTTCTGGGAGGCCAAGGGGCAAACTCCTCTTTTCCCCAGAATTTTTGGGCACGAGGCATCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTGACAGACTTGCGAGCTGGGGATCATGTGCTTCCGGTATTCACAGGGGAATGTGGAGAATGTGCACATTGCAAGTCTGAGGAGAGCAACATGTGTGACCTTCTGAGAATAGATACAAACAGAGGTGTGATGCTCAGTGATGAAAAAAGCAGGTTCTCCATTAATGGCGACCCTGTCAACCACTTTCTTGGCACTTCCACTTTCAGTGAATACACTGTGGTTCACTCTGGCTGCCTTGCAAAGATCAACCCTCTGGCACCTATGGATAAAGTCTGTGTTCTCAGCTGCGGCATTTCGACTGGATTGGGAGCAACTCTGAATGTGGCAAAGCCAAAGAAAGGTTCCTCTGTTGCAGTCTTTGGCCTTGGAACTGTCGGCCTTGCTGCTGCAGAGGGGGCAAGAATTGCTGGGGCATCTAGGATCATTGGGATTGACTTGAACCCTAGCAGATTTGAAGCAGCCAAGAAATTTGGGGTGACTGAGTTTATAAATCCAAAGGATTATGATAAACCAGTTCAAGAGGTTATTGCAGAGATGACAAACGGTGGAGTGGACCGCAGTGTGGAGTGCACTGGAAACATCAACGCCATGATTTCTGCTTTTGAATGTGTTCATGATGGTTGGGGAGTTGCAGTTCTTGTAGGAGTACCCACCAAGGATGCAGTGTTCATGACCAAGCCAATCAATGTGCTGAACGAAAGAACACTAAAAGGGACTTTCTTTGGGAACTACAAGCCCAGGACAGATCTTCCGTCTATTGTTGACATGTACATGAGCAAGAAGTTGGAATTGGAAAAGTTTATAACACACAGAGTTCCATTCTCTGAGATTAACAAGGCGTTCGAGTTGATGATAAGGGGAGAGGGGCTACGCTGTATCATTGACATCGACGAATAG 1116 0.4731 MLCAAVAWEAGKPLVMERVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEASGIVESVGEGVTDLRAGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTNRGVMLSDEKSRFSINGDPVNHFLGTSTFSEYTVVHSGCLAKINPLAPMDKVCVLSCGISTGLGATLNVAKPKKGSSVAVFGLGTVGLAAAEGARIAGASRIIGIDLNPSRFEAAKKFGVTEFINPKDYDKPVQEVIAEMTNGGVDRSVECTGNINAMISAFECVHDGWGVAVLVGVPTKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSIVDMYMSKKLELEKFITHRVPFSEINKAFELMIRGEGLRCIIDIDE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2538g00015 371 CDD alcohol_DH_plants 4 368 - -
Pral2538g00015 371 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 334 IPR036291 -
Pral2538g00015 371 SUPERFAMILY GroES-like 4 177 IPR011032 -
Pral2538g00015 371 FunFam Alcohol dehydrogenase class-P 174 312 - -
Pral2538g00015 371 FunFam alcohol dehydrogenase 1-like isoform X1 10 173 - -
Pral2538g00015 371 SUPERFAMILY GroES-like 319 367 IPR011032 -
Pral2538g00015 371 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 60 74 IPR002328 GO:0008270|GO:0016491
Pral2538g00015 371 Gene3D - 174 312 - -
Pral2538g00015 371 Pfam Zinc-binding dehydrogenase 198 322 IPR013149 -
Pral2538g00015 371 Pfam Alcohol dehydrogenase GroES-like domain 28 154 IPR013154 -
Pral2538g00015 371 PANTHER ALCOHOL DEHYDROGENASE 4 367 - -
Pral2538g00015 371 Gene3D - 10 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2538g00015 Pral-Chr2538 127299 130338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2538g00015 28 369 Monolignol Biosynthesis Gene Families AT1G72680 23.478 4.39e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2538g00015 K18857 - zju:107426564 679.478