Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2538g00014 ATGCATATTAGACAGATGTGTCATGCCCAGAGGCTAATAAGTTGTGTCCGGACGCTAAGGAGCAGTATTTCGAGGAGATTTTCTACTAATTCGTACCCGCATTCCTCATCTGCAGATTTCACCACGATGTCCACCACTGCTGGTCTGACGATTCCATGCAAAGCTGCAGTAGCATGGGAAGCAGGGAAACCATTGGTGATGGAACGAGTGGAAGTAGCTCCACCACAGGCGATGGAAGTGAGGATCAAGGTCAAATACACGTCTCTCTGCCACACTGATCTCTACTTCTGGGAGGCCAAGGGGCAAACTCCTCTTTTCCCCAGAATTTTTGGGCACGAGGCATCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTGACAGACTTGCGAGCTGGGGATCATGTGCTTCCGGTATTCACAGGGGAATGTGGAGAATGTGCACATTGCAAGTCTGAGGAGAGCAACATGTGTGACCTTCTGAGAATAGATACAAACAGAGGTGTGATGCTCAGTGATGAAAAAAGCAGGTTCTCCATTAATGGCGACCCTGTCAACCACTTTCTTGGCACTTCCACTTTCAGTGAATACACTGTGGTTCACTCTGGCTGCCTTGCAAAGATCAACCCTCTGGCACCTATGGATAAAGTCTGTGTTCTCAGCTGCGGCATTTCGACTGGATTGGGAGCAACTCTGAATGTGGCAAAGCCAAAGAAAGGTTCCTCTGTTGCAGTCTTTGGCCTTGGAACTGTCGGCCTTGCTGCTGCAGAGGGGGCAAGAATTGCTGGGGCATCTAGGATCATTGGGATTGACTTGAACCCTAGCAGATTTGAAGCAGCCAAGAAATTTGGGGTGACTGAGTTTATAAATCCAAAGGATTATGATAAACCAGTTCAAGAGGTTATTGCAGAGATGACAAACGGTGGAGTGGACCGCAGTGTGGAGTGCACTGGAAACATCAACGCCATGATTTCTGCTTTTGAATGTGTTCATGATGGTTGGGGAGTTGCAGTTCTTGTAGGAGTACCCACCAAGGATGCAGTGTTCATGACCAAGCCAATCAATGTGCTGAACGAAAGAACACTAAAAGGGACTTTCTTTGGGAACTACAAGCCCAGGACAGATCTTCCGTCTATTGTTGACATGTACATGAGCAAGAAGTTGGAATTGGAAAAGTTTATAACACACAGAGTTCCATTCTCTGAGATTAACAAGGCGTTCGAGTTGATGATAAGGGGAGAGGGGCTACGCTGTATCATTGACATCGACGAATAG 1269 0.4728 MHIRQMCHAQRLISCVRTLRSSISRRFSTNSYPHSSSADFTTMSTTAGLTIPCKAAVAWEAGKPLVMERVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEASGIVESVGEGVTDLRAGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTNRGVMLSDEKSRFSINGDPVNHFLGTSTFSEYTVVHSGCLAKINPLAPMDKVCVLSCGISTGLGATLNVAKPKKGSSVAVFGLGTVGLAAAEGARIAGASRIIGIDLNPSRFEAAKKFGVTEFINPKDYDKPVQEVIAEMTNGGVDRSVECTGNINAMISAFECVHDGWGVAVLVGVPTKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSIVDMYMSKKLELEKFITHRVPFSEINKAFELMIRGEGLRCIIDIDE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2538g00014 422 CDD alcohol_DH_plants 51 419 - -
Pral2538g00014 422 Pfam Alcohol dehydrogenase GroES-like domain 79 205 IPR013154 -
Pral2538g00014 422 SUPERFAMILY GroES-like 46 228 IPR011032 -
Pral2538g00014 422 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 211 385 IPR036291 -
Pral2538g00014 422 PANTHER ALCOHOL DEHYDROGENASE 50 418 - -
Pral2538g00014 422 Gene3D - 225 363 - -
Pral2538g00014 422 SUPERFAMILY GroES-like 370 418 IPR011032 -
Pral2538g00014 422 Gene3D - 61 412 - -
Pral2538g00014 422 Pfam Zinc-binding dehydrogenase 249 373 IPR013149 -
Pral2538g00014 422 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 111 125 IPR002328 GO:0008270|GO:0016491
Pral2538g00014 422 FunFam alcohol dehydrogenase 1-like isoform X1 61 224 - -
Pral2538g00014 422 FunFam Alcohol dehydrogenase class-P 225 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2538g00014 Pral-Chr2538 126657 130338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2538g00014 79 420 Monolignol Biosynthesis Gene Families AT1G72680 23.478 5.62e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2538g00014 K18857 - zju:107426564 697.582