Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2538g00012 ATGTATCATACTCGGAAGCTAACGAGTTGTGTACGGCCGCTTAGGAGCATTATTTCGAGGAGATATTCTCCTAATTCGTACTCGCATGCTTCATCTGCAGATTTCACCACAATGTCGAGCACTGCTGGTCTGACGATTCCATGCAAAGCTGCAGTAGCATGGGAAGCAGGGAAACCATTGGTGATGGAACGAGTGGAGGTAGCTCCACCACAGGCGATGGAAGTGAGGATCAAGGTCAAATATACGTCTCTCTGCCACACTGATCTCTACTTCTGGGAGACCAAGGGGCAAACTCCTCTTTTCCCCAGAATTTTTGGGCACGAGGCAGCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTGACAGACGTGCAAGCTGGGGATCATGTGCTTCCGGTATTCACAGGGGAATGTGGAGAATGTGCACATTGCAAGTCTGAGGAGAGCAACATGTGTGACCTTCTGAGAATAGATCCAAACAGAGGAGTGATGCTCAGTGATGAAAAAAGCAGGTTCTCCATTAATGGCGACCCTATCAACCACTTTCTTGGCACTTCCACTTTCAGTGAATACACTGTGGTTCACTCTGGCTGCCTCGCAAAGATCAACCCTCTGGCACCTATGGATAAAGTCTGTGTTCTCAGCTGCGGCATTTCGACTGGATTGGGAGCAACTCTGAATGTGGCAAAGCCAAAGAAAGGTTCCTCTGTTGCGGTCTTTGGTCTCGGACCTGTCGGCCTTGCTGCTGCAGAGGGGGCAAGAATTGCTGGGGCATCTAGGATCATTGGGATTGACTTGAACCCTAGCAGACTTGAAGCAGCCAAGAAATTTGGGGTGACTGAGTTTATAAATCCAAAGGATTATGATAAACCAGTTCAAGAGGTTATTGCAGAGATGACAAACGGTGGAGTGGACCGCAGTTTGGAGTGCACTGGAAACATCAACACCATGATTTCTGCTTTTGAATGTGTTCATGATGGTTGGGGAGTTGCAGTTCTTGTAGGAATACCCACCAAGGATGCAGTGTTCATGACCAAGCCAATCAATGTGCTCAGCGAAAGAACACTAAAAGGGACTTCCTTTGGGAACTACAAGCCCAGGACAGATCTTCCATCTATTGTTGATATGTACATGAGCAAGAAGTTGGAATTGGAGAAGTTTATAACACACAGAGTTCCATTCTCTGAGATTAACAAGGCGTTCGAGCTGATGATAAGGGGAGAAGGGCTACGCTGCGTCATTGACATCGACGAATAG 1254 0.4753 MYHTRKLTSCVRPLRSIISRRYSPNSYSHASSADFTTMSSTAGLTIPCKAAVAWEAGKPLVMERVEVAPPQAMEVRIKVKYTSLCHTDLYFWETKGQTPLFPRIFGHEAAGIVESVGEGVTDVQAGDHVLPVFTGECGECAHCKSEESNMCDLLRIDPNRGVMLSDEKSRFSINGDPINHFLGTSTFSEYTVVHSGCLAKINPLAPMDKVCVLSCGISTGLGATLNVAKPKKGSSVAVFGLGPVGLAAAEGARIAGASRIIGIDLNPSRLEAAKKFGVTEFINPKDYDKPVQEVIAEMTNGGVDRSLECTGNINTMISAFECVHDGWGVAVLVGIPTKDAVFMTKPINVLSERTLKGTSFGNYKPRTDLPSIVDMYMSKKLELEKFITHRVPFSEINKAFELMIRGEGLRCVIDIDE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2538g00012 417 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 206 380 IPR036291 -
Pral2538g00012 417 Gene3D - 56 407 - -
Pral2538g00012 417 Pfam Alcohol dehydrogenase GroES-like domain 74 200 IPR013154 -
Pral2538g00012 417 CDD alcohol_DH_plants 46 414 - -
Pral2538g00012 417 SUPERFAMILY GroES-like 41 223 IPR011032 -
Pral2538g00012 417 SUPERFAMILY GroES-like 365 413 IPR011032 -
Pral2538g00012 417 FunFam Alcohol dehydrogenase class-P 220 358 - -
Pral2538g00012 417 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 106 120 IPR002328 GO:0008270|GO:0016491
Pral2538g00012 417 Gene3D - 220 358 - -
Pral2538g00012 417 PANTHER ALCOHOL DEHYDROGENASE 45 413 - -
Pral2538g00012 417 FunFam alcohol dehydrogenase 1-like isoform X1 56 219 - -
Pral2538g00012 417 Pfam Zinc-binding dehydrogenase 243 368 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2538g00012 Pral-Chr2538 118524 123333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2538g00012 74 415 Monolignol Biosynthesis Gene Families AT1G72680 24.138 3.45e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2538g00012 K18857 - zju:107426564 691.419