Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2538g00009 ATGGCGGTGACGAAGCTTTTCTCTCTCTACATTTTCATGTTCACATTCTTATTCTGCAGCCACTACAACGACAAATCTAGTGCCTTTGCAGTCTCTTTGCCGCCTTCTTCATCTTCATTTTCTTCGGATGTCGAGCTTCTCTTGGGTAAAATCAGAGCTACCCTTCAAGGTAACGCCGATAACCTCGTTTTGTCTTCATGGAATTCCTCTATACCGCTTTGCCAATGGAGGGGACTCAAATGGATATTCGCAAATGGCTCTCCCCTGTCATGCAATGACTTGTCTTTACCCCAATGGACTAATCTTTCGCTTTTCAGAGACCCCTCTTTACATTTACTCTCTCTTCAGCTTCCTTCTGCAAATCTCTCTGGTTCGCTTCCTAGGGAGCTTGCAGAGTTTCCTATGCTTCAGAGTCTCTACCTCAACATCAATTCGTTGAGAGGGACAGTTCCTATTGAGCTTGGGTATAGTTCCTCACTCAACGATGTCGTTTTGGATGACAATATGTTGAGTGGAGCTTTGCCACCATCGATCTGGAATTTGTGTGATAAACTCGTTTCTCTTAGACTCCATGGCAACATGTTTTCCGGGTCTCTTCCTGAACCGGCATTGCCTGAATCTTCTTGCAAGAATATGCAATTTCTTGATTTGGGGAACAACAACTTCTCTGGGGTTTTTCCTGAATTCATCACACATTTTGGTGGGCTGAAGCAGCTTGACTTGGGAAATAATATGTTTACGGGTTCAATTCCTCAGAGCTTAGCTGGGCTAAATAGGCTAGAGAAACTGAATCTTTCTCACAACAATTTTAGTGGGGTTTTACCTACTTTCGGTGAATCATCCAAATTTGGTGTGGAGGTTTTTGAAGGAAATAACCCTGGCTTGTGTGGGGTACCTTTGAGAGCTTGTAGTGGAACTCCTAGATTGAGCTCTGGTGCAGTTGCTGGAATAGTTATCACTCTCATGACTGGAGCTGTGGTTTTAGTTTCTTTGCTTATTGGGTATATGCAAAATAGAAGGAGGAAGGGTAAGGGAGATAGTGAAGATGAATTGGAGGAAGATGAAGATGATGATGAAGAAAATGGTGCTATAGGCGGTGGTGAAGGTAAGCTTATGTTGTTCCAAGGTGGTGAGAATTTGTCATTAGATGACGTGTTGAATGCGACGGGACAAGTTATGGAGAAGACATGTTATGGGACTGTTTATAAGGCAAAGCTTGCTGATGGAGGAACCATTGCTTTGAGGTTGTTGAGAGAAGGTAGCTGCAGGGACAGGGCTTCGTGCTTGCCTGTTATTAAGCAATTGGGAAGGATTCGTCATGAGAATTTGATTCCTTTGAGAGCCTTCTATCAGGGGAAGAGAGGAGAAAAGCTTCTTATTTATGACTATCTTCCTCTCAGAACTCTTCATGATCTCTTACATGAAACTAAAGCTGGAAAGCCAGTGCTAAACTGGGCCAGGCGACACAAGATTGCATTGGGAATAGCCAGGGGACTAGCATATCTTCATACAGGACTTGATGTTCCAATCACTCATGGAAATGTACGATCCAAGAATGTGCTAGTTGATGAGTTCTTCGTTGCCCGGCTCACTGAGTTTGGGCTGGACAAGCTGATGATTCCTGCTGTAGCTGATGAAATGGTGGCACTTGCGAAAACAGATGGCTGCAAGGCTCCAGAGCTTCAAAGGATGAAGAAATGTAACTCGAGGACCGATGTTTATGCGTTTGGGATATTACTGTTGGAGATATTGATAGGGAAGAAACCAGGTAAGAACGGGAGGAGTGGGGAGGTTGTGGATCTGCCTTCCATGGTGAAAGTGGCAGTGTTGGAGGAGACCACAATGGAAGTGTTTGATGTGGAGCTTCTGAAAGGGATAAGGAGTCCAATGGAAGATGGGTTGGTGCAAGCACTGAAGGTAGCAATGGGATGTTGTGCCCCAGTGGCTTCAGTGAGACCAAGCATGGAGGAGGTTGTGAGACAGTTGGAGGAGAATAGGCCTAGAAATAGGTCTGCTTTATATAGCCCTACAGAAACAAGAAGTGGCAGCGGCACCCCTTTTTGA 2064 0.4477 MAVTKLFSLYIFMFTFLFCSHYNDKSSAFAVSLPPSSSSFSSDVELLLGKIRATLQGNADNLVLSSWNSSIPLCQWRGLKWIFANGSPLSCNDLSLPQWTNLSLFRDPSLHLLSLQLPSANLSGSLPRELAEFPMLQSLYLNINSLRGTVPIELGYSSSLNDVVLDDNMLSGALPPSIWNLCDKLVSLRLHGNMFSGSLPEPALPESSCKNMQFLDLGNNNFSGVFPEFITHFGGLKQLDLGNNMFTGSIPQSLAGLNRLEKLNLSHNNFSGVLPTFGESSKFGVEVFEGNNPGLCGVPLRACSGTPRLSSGAVAGIVITLMTGAVVLVSLLIGYMQNRRRKGKGDSEDELEEDEDDDEENGAIGGGEGKLMLFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLADGGTIALRLLREGSCRDRASCLPVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEMVALAKTDGCKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEVVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKVAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSGTPF 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2538g00009 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 201 IPR046959 -
Pral2538g00009 687 Gene3D Ribonuclease Inhibitor 204 305 IPR032675 -
Pral2538g00009 687 Gene3D Phosphorylase Kinase; domain 1 371 463 - -
Pral2538g00009 687 SUPERFAMILY Protein kinase-like (PK-like) 396 663 IPR011009 -
Pral2538g00009 687 Gene3D Ribonuclease Inhibitor 42 203 IPR032675 -
Pral2538g00009 687 ProSiteProfiles Protein kinase domain profile. 387 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2538g00009 687 Pfam Protein tyrosine and serine/threonine kinase 391 662 IPR001245 GO:0004672|GO:0006468
Pral2538g00009 687 SUPERFAMILY L domain-like 87 302 - -
Pral2538g00009 687 MobiDBLite consensus disorder prediction 663 687 - -
Pral2538g00009 687 FunFam Leucine-rich repeat receptor-like protein kinase 209 303 - -
Pral2538g00009 687 Pfam Leucine rich repeat 212 270 IPR001611 GO:0005515
Pral2538g00009 687 MobiDBLite consensus disorder prediction 668 687 - -
Pral2538g00009 687 Gene3D Transferase(Phosphotransferase) domain 1 465 679 - -
Pral2538g00009 687 MobiDBLite consensus disorder prediction 341 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2538g00009 Pral-Chr2538 88283 91281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2538g00009 7 687 Receptor kinase-like Gene Family AT3G24660 71.994 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral2538g00009 PK_Tyr_Ser-Thr 2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2538g00009 - - gmx:100814814 1073.54