Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2533g00011 ATGGAAGGTGGAAGAGTGTCACTGTTCAACTGTGTTCCTGGCCTTGATTTTACTGTTACTGCTACAAATCAAGCATCAGCAGCTATTGACTTGGTTTGCCAACAAGAAGGAAGGTTCAAACTTGTGATGGCTAAGGCTAACATGCCTGGCATGAACAGCATTTCTTTCCTCAATACACTACTTCTGAAGCATATCACTGTCATCTTTATATCCTCTGGACAAGATGATGGCGGAGCCAAGGCGGCTTTTGATAAAGGATCATGTTATCTCCTACAGGAACCAATCCAATCTGTGGATCTCATATCTCTGTGGCAACAAGTTTATAACTCAAATAATAGGAACTCAGCACAAGAGAATCACGCTGCAAAATCCAAACAAAAGGTGCTTGAATCAAGTGAAAATCAAGACAAAACACGCCATGATGTTAGAGTCAAGAAGAAAGGGAAGAGAGGATTTAACTCAAACCAGGTGAAATTAGACAACAATAATCATGCTGCAGAGAAGGAGGGAGAGGAAACAAGCGAACATAATAACAATCGATTCCCCTGGAAAAAGCCACGTATTTCTTGGACTTCGGATCTGCATCATAAATTTGTACAGGCCATAAGTGTTCTGGGAGAGAACAATATTCGTCCAAAATTGATACAAGAGATTATGAATGTTCCCTACCTGACATGTCGCCACATTGCTAGCCATCTACAGAAATTCAAATCTCAAGGAAGACATCTTCAGGATAAGTGCAACATTGATTTACTTCCAGGGTGTAAATCATCAAACTTCAGAGAGGGAAGCGAGTCATCCTCATCAAAAGAGAGCCAGAGTTACCCATGTAACCCCACATTAGCTGCTCCGCAAAATGAGAACCAGAGTGAAAACGCAGGCTGTGCAAACTTTTCATGTCAATATCAACCAGAATTGGTCAATTACGGAAACCAAGATCTAGAAGCTGTAGTGAGAGGAGCTGTACCAGATACTTTAATGGAGAAAAACCAGTATGATGACTTTGGAAATGGATTCACTGAAGATGATAGTGCCCAAAACTTTGAGACACAAACGAATCCTATCTTTGGAGACAGTTCTAGTTCACAGAAGTCTGATGGCAGCAAACCATGCTGCGCCGAGCCATCTGCTGTATTGGGAGAACTTGAGCCATGTGCTTCAATGAATCAAAGCCAAACCCTTACGGAAGATAAAAATATATTCAGAATTCTTGGTGGAGACAGTGAAGGATATGACTGTTTTAGAAGGGATCCAGATCATATTAGCCAAAACTCTGACATACTTAGTAGTTATATCCATGGACACGGAAACTCAGATAGCTGCAATCCTTGCTTTGCGAGTCTTTTGAAGGCTAATCCGTCTGCAAAGTCTGGAAATTACAACCCTAGTTGTGTTAGACCTTTGAAGTCCAAGACTGAAGCTTTGAACAATCAAAATCAAGCTTCAACAGAATATAATAATATCTCTGGAAAGAGCTCTAGTTCTCCGCAGTCTGATTATTACGATACTGAAAATGTACGATCATTGAAAGCCAAACCATGTTCTGTAGTGGGAGGAACTATTTCAAATGCTTTGATGGATCATGACAAAACCCTGACTCAACATAATAATATCTTAAGATTTCTTGGGGATGATTCTGATGCATATGGCTGTTTTGGAAATGCACCCAGTTCAGATGATACTGCAATGCTGAAGTATGCTGTGTTCAGATGA 1713 0.4057 MEGGRVSLFNCVPGLDFTVTATNQASAAIDLVCQQEGRFKLVMAKANMPGMNSISFLNTLLLKHITVIFISSGQDDGGAKAAFDKGSCYLLQEPIQSVDLISLWQQVYNSNNRNSAQENHAAKSKQKVLESSENQDKTRHDVRVKKKGKRGFNSNQVKLDNNNHAAEKEGEETSEHNNNRFPWKKPRISWTSDLHHKFVQAISVLGENNIRPKLIQEIMNVPYLTCRHIASHLQKFKSQGRHLQDKCNIDLLPGCKSSNFREGSESSSSKESQSYPCNPTLAAPQNENQSENAGCANFSCQYQPELVNYGNQDLEAVVRGAVPDTLMEKNQYDDFGNGFTEDDSAQNFETQTNPIFGDSSSSQKSDGSKPCCAEPSAVLGELEPCASMNQSQTLTEDKNIFRILGGDSEGYDCFRRDPDHISQNSDILSSYIHGHGNSDSCNPCFASLLKANPSAKSGNYNPSCVRPLKSKTEALNNQNQASTEYNNISGKSSSSPQSDYYDTENVRSLKAKPCSVVGGTISNALMDHDKTLTQHNNILRFLGDDSDAYGCFGNAPSSDDTAMLKYAVFR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2533g00011 570 FunFam Two-component response regulator 182 244 - -
Pral2533g00011 570 MobiDBLite consensus disorder prediction 340 369 - -
Pral2533g00011 570 NCBIfam myb-like DNA-binding domain, SHAQKYF class 185 237 IPR006447 GO:0003677
Pral2533g00011 570 Gene3D - 183 243 - -
Pral2533g00011 570 MobiDBLite consensus disorder prediction 479 502 - -
Pral2533g00011 570 MobiDBLite consensus disorder prediction 260 288 - -
Pral2533g00011 570 MobiDBLite consensus disorder prediction 114 180 - -
Pral2533g00011 570 SUPERFAMILY Homeodomain-like 183 238 IPR009057 -
Pral2533g00011 570 MobiDBLite consensus disorder prediction 123 141 - -
Pral2533g00011 570 Gene3D - 8 129 - -
Pral2533g00011 570 SUPERFAMILY CheY-like 14 110 IPR011006 -
Pral2533g00011 570 ProSiteProfiles Response regulatory domain profile. 1 108 IPR001789 GO:0000160
Pral2533g00011 570 PANTHER - 18 241 - -
Pral2533g00011 570 MobiDBLite consensus disorder prediction 338 369 - -
Pral2533g00011 570 MobiDBLite consensus disorder prediction 162 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2533g00011 Pral-Chr2533 123317 127395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2533g00011 19 239 Response Regulator Gene Family AT1G68210 33.473 2.97e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral2533g00011 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2533g00011 - - pcin:129322591 455.677