Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2533g00005 ATGGGGATGATTGCGTGGTGGTGGTGGTGGAGGAGAAGAAAATATGGCGATTCGGATTCTATAAGCAGATACTCCACTTATTCTCACACAGACAGTAGCAATGTCTACTTCGGAATCCCTGTTTTCTCCTACTCCGAGCTCGAAGCAGCCACCAACCATTTTGACCCTTCCACAGAGCTCGGAGATGGAGGCTTCGGCACTGTTTATTACGGTAAGCTTGAAGACGGGCGAGAAGTTGCTGTAAAACGCTTATACGAGCAAAACTACAAACAAGTAGAACAGTTCATGAATGAAGTGAGGATCCTCACTCGTTTACACCACAAAAACCTTGTCACCCTCTATGGCTGCACCTCCCGCCGCAGCCGGGAACTCCTCCTCGTCTACGAGTTCATCCCAAACCGCACCATCGCTCATCACCTCCACCTCCACAGAGATCCCAAAAAGCCCACCGTTTTACCATGGTCCACTCGCATGAAAATCGCTGTCCAAACCGCCAGAGCATTGGTCTACCTCCACGCCTCTGACATCATTCACCGCGACATCAAAACCAACAACATTCTCCTCGACGAAGGATTCAATGTTAAGGTTGCCGATTTTGGACTCTCAAGGTTGTTCCCCAACAATGTCACTCATGTTTCCACTGCTCCACAAGGGACACCGGGTTATCTCGATCCCGAATATCATAGTTGCTATCAGCTCACCAGCAAAAGTGATGTTTATAGCTTCGGAGTCGTGCTCATCGAGCTCATAACATCCATGGAGGCGGTCGACATGAGCCGGGACTCGGACTCCATAAATTTGTCGAGCTTAGCAGTGAGGAAGATTCAGAGGAGTGAGCTGAGCGAGCTGGTGGATCCTTCTCTTGGGTTTGAGCGTGATGGGGAGGTGAAGAGGATGGTGATATTGGTGGCTCAGTTGGCGTTTCAGTGTTTACAGACTAATAAGGAACTGAGACCTTCCATGGAGGAAGTTCTGGAGATGTTGGAGAGGATTCAAAGTGGGAGTGATCGGGTACAGGAGCACCCACGATTGCCACCGGAATCAGCAAAATGGGATGAGGTTGGGTTGTTGAAGAACGCAAATCCACCGCCTTATTCTCCCAACAGTGTTGCTGATAAATGGGTAAGCGAAACTACGACGCCCAATGTCAGTGCGTGA 1158 0.4965 MGMIAWWWWWRRRKYGDSDSISRYSTYSHTDSSNVYFGIPVFSYSELEAATNHFDPSTELGDGGFGTVYYGKLEDGREVAVKRLYEQNYKQVEQFMNEVRILTRLHHKNLVTLYGCTSRRSRELLLVYEFIPNRTIAHHLHLHRDPKKPTVLPWSTRMKIAVQTARALVYLHASDIIHRDIKTNNILLDEGFNVKVADFGLSRLFPNNVTHVSTAPQGTPGYLDPEYHSCYQLTSKSDVYSFGVVLIELITSMEAVDMSRDSDSINLSSLAVRKIQRSELSELVDPSLGFERDGEVKRMVILVAQLAFQCLQTNKELRPSMEEVLEMLERIQSGSDRVQEHPRLPPESAKWDEVGLLKNANPPPYSPNSVADKWVSETTTPNVSA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2533g00005 385 SUPERFAMILY Protein kinase-like (PK-like) 39 352 IPR011009 -
Pral2533g00005 385 Gene3D Phosphorylase Kinase; domain 1 25 130 - -
Pral2533g00005 385 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 26 130 - -
Pral2533g00005 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Pral2533g00005 385 CDD STKc_IRAK 60 331 - -
Pral2533g00005 385 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
Pral2533g00005 385 MobiDBLite consensus disorder prediction 362 385 - -
Pral2533g00005 385 Gene3D Transferase(Phosphotransferase) domain 1 132 341 - -
Pral2533g00005 385 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 379 IPR044652 GO:0004672
Pral2533g00005 385 FunFam Wall-associated receptor kinase-like 20 131 341 - -
Pral2533g00005 385 SMART serkin_6 54 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2533g00005 385 MobiDBLite consensus disorder prediction 335 385 - -
Pral2533g00005 385 Pfam Protein kinase domain 57 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2533g00005 385 ProSiteProfiles Protein kinase domain profile. 54 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2533g00005 Pral-Chr2533 16706 24576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2533g00005 12 385 Receptor kinase-like Gene Family AT1G25390 61.053 2.06e-159 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral2533g00005 Pkinase 5.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2533g00005 - - aip:107643858 509.99