Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2533g00004 ATGAACCCAATGGTTCTCTTCGTCATCCTCCTCTTCTGTGTTCTAGTCAGAACCACCCTCTGTTATGTGAATCCCCACTTCCAAGCTTGCGAGCCCCAAACCTGTGGGAACGGCCCAAACATAACCTACCCTTTCCATATCCATGGTAAACAAGAGAGCTTGTGCGGATTCCCTGGTTTCGGCCTTCTCTGTGCTTCCAATGGCTTCCCAACGCTCAATGTCTCCAATACTTTCTACATAGTCGATGAAATTTCCTACCATAATCTCTCTCTCCGAGTCTTCAATCCTAACTTCCTAATCTCCAATTCCACCAAATGTCTCTCTCCCTCCGACAACCTCACTCTCGACTTCAGATACGCTGTGGCTCCGAACCAGGAGGAGGTGCTGCTGTTCTTCGATTGCGACTTGCCGTCGCTGCCGGAGGAGATGAAACAAAACGTATTGGGGTGTTCTGAAGGGAACAGAACGAGGTCGGTGCTGGGCATGGCGGTGGATGACGCAGCTGACAAGTTGAAGTATGCGAAGGATAATTGCAGGGGTGGGCCGACAACGAGGACGGTGGTGGGCAATGTGGAAGGAGGGATAAGAGAGGCTCTGGGAAGAGGATTGTTGTTGAAGCCAAAGAATTGGACGGCGAGTAAGTGCGAGACATGCCGGCGCACTGGAGGGAGGTGTGGCTTCCTCGCCGGCGATGCGTATGACTTCAAGTGCTTCTGCCGCGACCGCGACCATCGTCGCCGATGTCGTCATGGTGCAGACAAAGGGACTTCGAAGCTGGGACTGGCATTAGGTTTAGGGGTTGGACTCCCAGGGATGATAACAATGGGGATGATTGCGTGGTGGTGGTGGTGGAGGAGAAGAAAATATGGCGATTCGGATTCTATAAGCAGATACTCCACTTATTCTCACACAGACAGTAGCAATGTCTACTTCGGAATCCCTGTTTTCTCCTACTCCGAGCTCGAAGCAGCCACCAACCATTTTGACCCTTCCACAGAGCTTGGAGATGGAGGCTTCGGCACTGTTTATTACGGTAAGCTTGAAGACGGACGAGAAGTTGCTGTAAAACGCTTATACGAGCAACATTACAAACAGGTAGAACAGTTCATGAATGAAGTGAGGATCCTCACTCGTTTACACCACAAAAACCTTGTCACTCTCTATGGCTGCACCTCCCGCCACAGCCGAGAACTCCTCCTCGTCTACGAGTTCATCCCAAACCGCACCGTCGCTCATCACCTCCACCTCCACAGAGATCCCAAAAAGCCCACTGTTTTTCCATGGTCCACTCGCATGAAAATCGCTGTCCAAACCGCCAGAGCATTGGTCTACCTCCATGCCTCTGAAATCATTCACCGCGACATCAAAACCAACAACATTCTCCTCGACGAAGGATTCAATGTTAAGGTTGCAGATTTTGGACTCTCAAGGTTGTTCCCCAACAATGTCACTCATGTTTCCACTGCTCCACAAGGGACACCGGGTTATCTCGATCCCGAATATCATAGTTGCTATCAGCTCACCAGCAAAAGTGATGTTTATAGCTTCGGAGTTGTGCTCATCGAGCTCATAACATCCATGGAGGCGGTCGACATGAGCCGGGACTCGGACTCCATAAACTTGTCGAGCTTAGCAGTGAGGAAGATTCAGAGGAGTGAGCTGAGCGAGCTGGTGGATCCTTCTCTTGGGTTTGAGCGTGATGGGGAGGTGAAGAGGATGGTAATATTGGTGGCTCAGGTGGCGTTTCAGTGTTTACAGACTAATAAGGAACTGAGACCTTCCATGGAGGAAGTTCTGGAGATGTTGGAGAGGATTCAAAGTGGGAGTGATCGGGTACAGGAGCACCCACGATTGCCACCGGAATCACCCAAATGGGATGAGGTTGGGTTGTTGAAGAACGCAAATCCACCGCCTTATTCTCCCAACAGTGTTGCTGATAAATGGGGAAGCGAAACCACGACGCCCAATGTCAGTGCTTGA 1980 0.5071 MNPMVLFVILLFCVLVRTTLCYVNPHFQACEPQTCGNGPNITYPFHIHGKQESLCGFPGFGLLCASNGFPTLNVSNTFYIVDEISYHNLSLRVFNPNFLISNSTKCLSPSDNLTLDFRYAVAPNQEEVLLFFDCDLPSLPEEMKQNVLGCSEGNRTRSVLGMAVDDAADKLKYAKDNCRGGPTTRTVVGNVEGGIREALGRGLLLKPKNWTASKCETCRRTGGRCGFLAGDAYDFKCFCRDRDHRRRCRHGADKGTSKLGLALGLGVGLPGMITMGMIAWWWWWRRRKYGDSDSISRYSTYSHTDSSNVYFGIPVFSYSELEAATNHFDPSTELGDGGFGTVYYGKLEDGREVAVKRLYEQHYKQVEQFMNEVRILTRLHHKNLVTLYGCTSRHSRELLLVYEFIPNRTVAHHLHLHRDPKKPTVFPWSTRMKIAVQTARALVYLHASEIIHRDIKTNNILLDEGFNVKVADFGLSRLFPNNVTHVSTAPQGTPGYLDPEYHSCYQLTSKSDVYSFGVVLIELITSMEAVDMSRDSDSINLSSLAVRKIQRSELSELVDPSLGFERDGEVKRMVILVAQVAFQCLQTNKELRPSMEEVLEMLERIQSGSDRVQEHPRLPPESPKWDEVGLLKNANPPPYSPNSVADKWGSETTTPNVSA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2533g00004 659 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
Pral2533g00004 659 SUPERFAMILY Protein kinase-like (PK-like) 313 632 IPR011009 -
Pral2533g00004 659 Gene3D Phosphorylase Kinase; domain 1 299 404 - -
Pral2533g00004 659 SMART serkin_6 328 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2533g00004 659 MobiDBLite consensus disorder prediction 636 659 - -
Pral2533g00004 659 Gene3D Transferase(Phosphotransferase) domain 1 406 615 - -
Pral2533g00004 659 ProSiteProfiles Protein kinase domain profile. 328 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2533g00004 659 CDD STKc_IRAK 334 605 - -
Pral2533g00004 659 MobiDBLite consensus disorder prediction 608 659 - -
Pral2533g00004 659 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Pral2533g00004 659 Pfam Wall-associated receptor kinase C-terminal 190 241 IPR032872 -
Pral2533g00004 659 MobiDBLite consensus disorder prediction 608 622 - -
Pral2533g00004 659 Pfam Protein kinase domain 331 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2533g00004 659 FunFam Wall-associated receptor kinase-like 20 405 615 - -
Pral2533g00004 659 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 653 IPR044652 GO:0004672
Pral2533g00004 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2533g00004 Pral-Chr2533 16706 30713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2533g00004 215 659 Receptor kinase-like Gene Family AT1G25390 52.863 2.52e-154 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral2533g00004 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2533g00004 - - aip:107643858 718.383