Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2533g00001 ATGGCTGTGATGATCCAAGTTCAAACAATTATTGATCTGGACAAGAATAACGGAAGGAAGAAGCTGCGGCTTCTAAACGTCTCCCAGAAGAACATCATCACAGTCTCGGACGAAGATCTAGACAAGATTCTGAAATCCAAAGGTTATTGTCAGGTTTTCGACACAAACCAAGTACCAAGTTCTTCTCCGCCGAACTCAGCTTTGGTCTCTTTTGAGATCCTAAATCATGGGAATTTGATCAAATGCAGTCACTGTGACCATGTGCATCGTCCCGCTGGTTTTTCCAAACATGTCTGTTCTGACTTTGATGTCTACTGGGAAGACTCATCCAGTCAAATTGTTATCCAAGTACGATTGTCTCATGATTGTGATAAGTGTCACAACCACTTGGGAGGCCAGTGTCTTCTTGATGCCAACGACAAGTTTTACTGCAAATATGCCAATCGTGGTCTCCTGCCATGGCTTATAAGAATCAAAATAGCCATAGAAACTGCCACTGCTTTGGCTTACCTTCATGCTTCAGACATTATCCATTGTGATGTCAAAACCAACAACATCCTCCTAGAAAATAACTTTTGTGTTAAGGTTGTAGATTTTGGTCTTTCAAGGTTGTTTCCCAATGCTGTCACGCATGTTTCCACTGCTTCACAAGGGAAACCCAGATATTATGTGGGATAA 678 0.4189 MAVMIQVQTIIDLDKNNGRKKLRLLNVSQKNIITVSDEDLDKILKSKGYCQVFDTNQVPSSSPPNSALVSFEILNHGNLIKCSHCDHVHRPAGFSKHVCSDFDVYWEDSSSQIVIQVRLSHDCDKCHNHLGGQCLLDANDKFYCKYANRGLLPWLIRIKIAIETATALAYLHASDIIHCDVKTNNILLENNFCVKVVDFGLSRLFPNAVTHVSTASQGKPRYYVG 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2533g00001 225 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2533g00001 225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Pral2533g00001 225 SUPERFAMILY Protein kinase-like (PK-like) 147 222 IPR011009 -
Pral2533g00001 225 Gene3D Transferase(Phosphotransferase) domain 1 132 223 - -
Pral2533g00001 225 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 147 222 IPR044652 GO:0004672
Pral2533g00001 225 Pfam Protein kinase domain 159 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2533g00001 Pral-Chr2533 64 2194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2533g00001 149 222 Receptor kinase-like Gene Family AT1G25390 72.973 4.66e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral2533g00001 Pkinase 9.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2533g00001 - - gmx:100790240 127.872