Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral252g00012 ATGGAATTTCTCACAGAAGTCACATTCGACGCTTCTTCCTCTTCTTCTTCCTCCTCCTCTTCTTGGTTGGAGGTCAGCTCGTTGAGCAGGGAGCCGAAACTGTTACTGGCGTCGGAGCGACCCAAGAAGCGAGCGGGACGGAGGGTTTTCAAGGAGACGAGGCATCCCGTGTACAGAGGAGTGCGACGGAGGAACAAAGACAAGTGGGTTTGCGAGGTTCGTGTGCCGAACGGTAACACCAGGATTTGGCTCGGAACATATGCCACGGTGGAGATGGCCGCTCGTGCTCATGACGTGGCGGCTCTGGCTCTTCGTGGAAAATCGGCTTGCCTGAATTTCGCTGACTCAGCTTGGCGGTTGCCTCTACCGGAATCAACCAATGCGGCGGAGATCAGACGGGTGGCGGCTCTGGCTGCTGAGGAATTCGGCAGGAGTGATGATGATTTTGAAGTTTGCAGTCTCAGTAGTGCAACGGCCGACGAGGAAGTCATCGGAGATGCGCCGAATGTACAGGATTATTGTGAAGAAGATGAAGCGACGTATATTTATCAAAATCCAGCTGTGTCAACGAAATTTGACGAGCTCCGTCATTTGATAGTGAGTATGGCGGAGGAGCCGCTCCGATCGCCACCCTCTGTTAGGCCATATGGGTGGAGCTGGGATGACATGGAGGCAGATACTGAGGTCTCACTGTGGCAATACTGA 705 0.5376 MEFLTEVTFDASSSSSSSSSSWLEVSSLSREPKLLLASERPKKRAGRRVFKETRHPVYRGVRRRNKDKWVCEVRVPNGNTRIWLGTYATVEMAARAHDVAALALRGKSACLNFADSAWRLPLPESTNAAEIRRVAALAAEEFGRSDDDFEVCSLSSATADEEVIGDAPNVQDYCEEDEATYIYQNPAVSTKFDELRHLIVSMAEEPLRSPPSVRPYGWSWDDMEADTEVSLWQY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral252g00012 234 MobiDBLite consensus disorder prediction 7 27 - -
Pral252g00012 234 CDD AP2 58 116 IPR001471 GO:0003700|GO:0006355
Pral252g00012 234 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Pral252g00012 234 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Pral252g00012 234 SUPERFAMILY DNA-binding domain 57 116 IPR016177 GO:0003677
Pral252g00012 234 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Pral252g00012 234 MobiDBLite consensus disorder prediction 1 29 - -
Pral252g00012 234 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Pral252g00012 234 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 12 234 IPR045277 GO:0003700
Pral252g00012 234 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Pral252g00012 234 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral252g00012 Pral-Chr252 356200 356965 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral252g00012 34 234 AP2-EREBP Transcription Factor Family AT1G12610 50.485 1.21e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral252g00012 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral252g00012 - - pcin:129312011 257.299