Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2521g00008 ATGGCGTCGTCATCGAATTCACCATGTGCGGCCTGCAAGTTTCTGCGGCGAAAGTGCCAACCAGAGTGCGTGTTTGCACCCTACTTCCCCCCAGATCAGCCACAGAAATTCGCGAATGTGCACAAAGTATTTGGAGCGAGCAATGTCACCAAGCTCCTGAACGAGTTACACCCCCACCAGCGTGAAGACGCCGTCAATTCTCTGGCCTACGAGGCCGACATGCGCCTCCGTGACCCCGTGTACGGCTGCGTGGGAGTGATCTCTCTCCTGCAGCACCAGCTCCGGCAGCTGCAAATGGACCTCACCTGCGCAAAGTCGGAGCTGTCCAGGTACCAGACCTTGGGCATCACCGGCCACAGCCTCATCGCGGCTCACCACCAGGCCCAGAATATGGGCATGAACCTGATCGGCGACCACCATCACTACCACCACCAGTTCTTCCCTCGAGACCATCATCAGTCCTCCATGATCAGGACATTTGATGCGGGTAACAACTATGACGCTGGTCTCCTGTCCATGAACGTCTCTGCAAGCATAGGCCAGCTCAATCAGTTTCCGCATCAGCACCCTCGAGCTGCTGCCGGGGACGATCGTCGAACTATTGATCCCTCTTAG 615 0.5707 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGITGHSLIAAHHQAQNMGMNLIGDHHHYHHQFFPRDHHQSSMIRTFDAGNNYDAGLLSMNVSASIGQLNQFPHQHPRAAAGDDRRTIDPS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2521g00008 204 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Pral2521g00008 204 Coils Coil 87 114 - -
Pral2521g00008 204 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Pral2521g00008 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2521g00008 Pral-Chr2521 53153 53813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2521g00008 2 204 AS2 family AT1G65620 71.429 5.11e-92 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral2521g00008 LOB 2.7e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2521g00008 - - jre:109004073 363.229