Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2517g00003 ATGCTTCGTGGGATTGCCTTTTCCTTGTTTGGGCTTTTGGCCATCTTGGGAGTACAGCTTCCTGCAACAAGGGCTGATTGCCCATTGGATTTAAGTACTTCAAACTTTACAATGGCATCCTCCGTCTGCTCAGACCAAGGTGACAGAAATGGCTGTTGTCGCTACATTAATGCTAATATTGCCGTTTCTGTTGCTCGATATGCAAATGGAACAGGCAACCTTGGAGTCCCTCCAGATGCTTCTGACTTCTGCCTCCAGACCATAACTGAGACTTTGCAACTTTATGGAGTTTCACCAAATGCAGCTGTTTTCTGTGGCTTTGGGACAAAAGTCCCGGTTAATTACGAGTGTAAAGGTCGAACTACTGTCACACAGATGCTGCAATCTCCAAGATTTGGAGAGGTCACTAAAAATTGCAAAGTGCCTCTTGTAAAGGAAAGTGATTGCAAGCAATGTTTGAATGCTGCCATTGGTTACCTACATAATGTAATAGGTGTACAGGATAATATCACATTAAGTACATGCCGTGATGCCACTTTTACTGCGTTGGCAAGCCAAGTTGATGATATGTCTACTGTTGAAACTGCGAGCTGTTTCTTTGGGGTTCAAGGACTTCTCGGGCCTACTGGTATGAATGTTTCAGAGCCATCCACTTCACCAACTCCTGAGGCTTCTCCAAGTCCTCCAGCTGCTGATAGCCCAAGTCCATTGCTGATAGGTGTACCACTTAAAAGAAATCACCATAGATACCACTTGACATTAATCCCAGGTATCGGTATTGCCGTCACAGCTGCTGCGGTTATGATGCTTGTAGTTTTGGTCGTTTTAATTCGTCAAAAAGGCAGAGAGCTAGAGGGACCTGATCATTTAAGTAAAACCTCCTCGAAATCCTTACCCCCTTCTGCCACATGGAGATTTCAGGATGGTCCTTCGTCTACGTTTCGAAAATTCAACTATAGCGAGATTAAGAGGGCCACAGATAATTTTGGCACTGTGATTGGGCAAGGAGGATTTGGAACTGTGTATAAAGCTGATTTTAGTGATGGTTTAGTGACAGCAGTAAAGCGTATGGATAAATCAGCAGAGCAAAAGGGGGATGAGTTTTGTAGAGAAATAGAGCTTGTTGCCCGGCTTCATCACCGCCATCTAGTTGCATTAAGAGGATTTTGCATTAAAAAACATGAGAGGTTTCTGATATACGAGTACATGGAAAATGGAAGCTTGAAAGACCATCTTCATTCCCCTGGGAAAACGCCCCTGAGTTGGCGAAATAGAATCCAAATTGCCATTGACGTGGCTAATGCACTGGACTACCTTCATTTCTATTGCGATCCTCCTCTCTGCCACAGAGACATTAAATCTAGCAACATTTTACTGGATGAGAAATTTGTTGCAAAGCTAGCTGATTTCGGACTGGCACACGCTTCAAAATATGGTTCTATATGCTTTGAACCAGTAAATACTGATATCCGGGGAACTCCAGGTTATATGGATCCAGAATATGTTGTTACTCAAGAACTCACCGAGAAAAGTGATATTTACAGTTTTGGTGTGCTATTATTAGAGATTGTAACTGGAAGACGAGTAATTCAAGATAATAAGAATTTGGTAGAATGGGCACAACCATTCATGGAATCCGAATCAAGATTGATGGAGTTAGTGGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTCCAAACAGTTGTCTCTATAGTAGGATGGTGCACCCAGAGAGAAGGCAGGGCAAGGCCTTCAATAAAACAAGTCCTTAGACTTCTGTATGAGACTTCAGAACCCATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAAGAATATGCAGCAAATCAGCAATCTGGCAGAAGAAGCAAGGGAAAGTTACACAGAAGTGAATCAAATTATCACAGTGGGGATGGAAGATATTTAGCTTCTTCTTCAAGTACATCCAGGTCCTATTGCAGTAGAAGTTTCTTACTTGAGACAGGATCCCCGCAGTCCCCTCAGAATATTTTTTCAGTTTAA 2028 0.4255 MLRGIAFSLFGLLAILGVQLPATRADCPLDLSTSNFTMASSVCSDQGDRNGCCRYINANIAVSVARYANGTGNLGVPPDASDFCLQTITETLQLYGVSPNAAVFCGFGTKVPVNYECKGRTTVTQMLQSPRFGEVTKNCKVPLVKESDCKQCLNAAIGYLHNVIGVQDNITLSTCRDATFTALASQVDDMSTVETASCFFGVQGLLGPTGMNVSEPSTSPTPEASPSPPAADSPSPLLIGVPLKRNHHRYHLTLIPGIGIAVTAAAVMMLVVLVVLIRQKGRELEGPDHLSKTSSKSLPPSATWRFQDGPSSTFRKFNYSEIKRATDNFGTVIGQGGFGTVYKADFSDGLVTAVKRMDKSAEQKGDEFCREIELVARLHHRHLVALRGFCIKKHERFLIYEYMENGSLKDHLHSPGKTPLSWRNRIQIAIDVANALDYLHFYCDPPLCHRDIKSSNILLDEKFVAKLADFGLAHASKYGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRVIQDNKNLVEWAQPFMESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQAVEDEEYAANQQSGRRSKGKLHRSESNYHSGDGRYLASSSSTSRSYCSRSFLLETGSPQSPQNIFSV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2517g00003 675 MobiDBLite consensus disorder prediction 618 648 - -
Pral2517g00003 675 Pfam SPARK 23 163 IPR043891 -
Pral2517g00003 675 FunFam Putative receptor-like protein kinase 295 402 - -
Pral2517g00003 675 CDD STKc_IRAK 333 595 - -
Pral2517g00003 675 Pfam Protein kinase domain 331 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2517g00003 675 PANTHER OS01G0750732 PROTEIN 154 620 - -
Pral2517g00003 675 ProSiteProfiles Protein kinase domain profile. 327 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2517g00003 675 Gene3D Transferase(Phosphotransferase) domain 1 403 621 - -
Pral2517g00003 675 SUPERFAMILY Protein kinase-like (PK-like) 308 598 IPR011009 -
Pral2517g00003 675 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Pral2517g00003 675 Gene3D Phosphorylase Kinase; domain 1 305 402 - -
Pral2517g00003 675 MobiDBLite consensus disorder prediction 221 235 - -
Pral2517g00003 675 SMART serkin_6 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2517g00003 675 FunFam Putative receptor-like protein kinase 403 603 - -
Pral2517g00003 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Pral2517g00003 675 MobiDBLite consensus disorder prediction 210 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2517g00003 Pral-Chr2517 28950 33509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2517g00003 23 674 Receptor kinase-like Gene Family AT3G19300 59.939 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pral2517g00003 Pkinase 3.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2517g00003 - - ahf:112715638 1014.22