Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2516g00001 ATGGAGCGTAGTAAAATCATAAGAGGAGTTGCTCTAGGAATTCTTTATCTACATGAATATTCTTGTCTAAAAATCATACATCGAGATCTCAAACCTAGCAATATTTTGTTGGATGATGAAATGAATCCAAAAATTTCAGATTTTGGCCTAGCTAAGATGGTTGCTATTAGTGAAAATGAAGGAAGTACAAATCGAATTGCTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTCGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATCAGTGGAAAGAAGAATACAGGTTGTCATGATTCACAATATGCCGGTGGCCTCTTAAGCTATACTTGGAAGCAATGGACGGACGACAAGTTGCTAGAGATACTGGATTCAAATATAAATGAATTGGGGTCATACAATGAAGTGATCCAGTGCATTCAAATTGGTTTATTATGCGTTCAAGAAAATCCAAATACAAGGCCTTCCATGGCCACAGTTGTTTCATATCTTAGCAATGATTCTATTCAATTGCCGTCACCACAGGAACCTGCTTTCTTTTTGCATGGCCAACCGGAGCCTATTATCACCAGTGCAAGTGGAGAACCATGCTCTGTTAATGAAGCTTCTATGAGTGAATTCTTTCCTCGCTAA 666 0.3679 MERSKIIRGVALGILYLHEYSCLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAISENEGSTNRIAGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISGKKNTGCHDSQYAGGLLSYTWKQWTDDKLLEILDSNINELGSYNEVIQCIQIGLLCVQENPNTRPSMATVVSYLSNDSIQLPSPQEPAFFLHGQPEPIITSASGEPCSVNEASMSEFFPR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2516g00001 221 Gene3D Transferase(Phosphotransferase) domain 1 1 184 - -
Pral2516g00001 221 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2516g00001 221 SMART serkin_6 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2516g00001 221 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 183 - -
Pral2516g00001 221 Pfam Protein kinase domain 4 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2516g00001 221 SUPERFAMILY Protein kinase-like (PK-like) 3 203 IPR011009 -
Pral2516g00001 221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Pral2516g00001 221 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2516g00001 Pral-Chr2516 21375 23146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2516g00001 1 221 Receptor kinase-like Gene Family AT4G23140 48.069 5.00e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2516g00001 Pkinase 3.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2516g00001 - - pcin:129286093 338.961