Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2514g00001 ATGGGGTTTTCCCAAGAAACCTGCACTGACTCCTGGGAGTCTTCGAATCCACAAAATGCTCCTGATACAGTCACCGATGACTACTACGACTATAACAAGCTCAAGTTCAGAAGCACTTGGAGAAAAATGCTCTGGATGATTGGGTCTGCCTGTATCTCCCTGCCTCGCCGCCGGCGGAACGCCGGGGTGATGATTCAGGGTCAAGGCAAAAACAAGGCGTGGCTACTGGCGGAGTCCGGCGGTTGTCCGGCGGAGTCGACGAATGCCGACCCACAATCGGTTCACTCATCTTTCAGGTTCAACATATGTTCTCAGGTTGAGCTGGAATCTTTGGAAATGAGTTCTTCCGCTGCTGCGACAGTCTTGATGGTGAATTTGGATAATGGGGTGAGTGAATCTGGAGCTCGGGAGCTAAAATGGTGGAGAATAGATTCATTGAATAAGAGCATATTGCCAGTGACCAATACTCTGATCAGATTCAACTACAGTGAAATCCTGTCTGCTACCCAGAATTTCTCCAAAGGCAGAGTATTGGGAAGAGGGGCGTTGAGCTGTGTTTTCAGAGGAAAAATTGGACTTCTGAGGAGTGCCGTGGCAATTAAGAGACTGGACAAAGAAGACAAGGAGTGCGCAAAGTCATTCTGTAGAGAACTGATGATTGCTAGCTCTCTTCACAACCCAAACGTTGTTCCTCTTGTGGGGTTTTGTGCTGATCCAGAGGAGGGTTTGTTTCTGGTCTACAAATTTGTCTCAGGAGGCAGCTTAGAGCGCCACTTGCATGGGAAGAAGAAGGGTGTAAAGGGAAATTCACCACTGCCTTGGTCTGTGAGATATAAAGTTGCAGTTGGGATCGCCGAAGCAATCTCTTATCTGCATAATGGAACTAAAAGATGTGTTGTTCACAGAGACATTAAGCCCTCTAACATTCTTCTTTCCTCTAGAAAGTCTCCCAAGCTATGTGATTTTGGATTAGCTACATGGACTTCAGCACCTTCGATTCATTTCCTTTGCAAAACGGTTAAAGGAACATTTGGCTATTTGGCTCCTGAGTATTTCCAACATGGGAAGGTGTCAGATAAGACTGATGTTTATGCTTTTGGAGTGGTGTTATTGGAACTCATAACTGGTAGGAAGCCCATTGAAGCAGAAAGGCCACCAGGAGAAGAGAATTTAGTCTCATGGGCTAAACCATTGCTTCAGAAAGGGAAAGAAGCCACTGAAGAACTGCTTGATCCTCAACTCAATTACACCTTAAAATCCTCAAACCAGATATCTCGTATGATTGAAGCTGCAGCAGCCTGTGTCACAAACGAAGAATCTCGCAGACCCGGCATTAACGAGATCATCGCAATCCTGAAAGGTCAAGAACCAGTCTTCTCTAAAAGGAGGAAGCCATCTTTCCGTGTTAATGGATCCGTATTTGATTCTTATACTCAGTTACAAGAAACAAACACAGAGATTAAAAGTCACTTGGCTTTGGCTATGTTGGGCATTTCAGAGTTTGAAGATGATGATTACCTCTTTGGTCGCTAA 1533 0.4527 MGFSQETCTDSWESSNPQNAPDTVTDDYYDYNKLKFRSTWRKMLWMIGSACISLPRRRRNAGVMIQGQGKNKAWLLAESGGCPAESTNADPQSVHSSFRFNICSQVELESLEMSSSAAATVLMVNLDNGVSESGARELKWWRIDSLNKSILPVTNTLIRFNYSEILSATQNFSKGRVLGRGALSCVFRGKIGLLRSAVAIKRLDKEDKECAKSFCRELMIASSLHNPNVVPLVGFCADPEEGLFLVYKFVSGGSLERHLHGKKKGVKGNSPLPWSVRYKVAVGIAEAISYLHNGTKRCVVHRDIKPSNILLSSRKSPKLCDFGLATWTSAPSIHFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAERPPGEENLVSWAKPLLQKGKEATEELLDPQLNYTLKSSNQISRMIEAAAACVTNEESRRPGINEIIAILKGQEPVFSKRRKPSFRVNGSVFDSYTQLQETNTEIKSHLALAMLGISEFEDDDYLFGR 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2514g00001 510 FunFam probable serine/threonine-protein kinase PBL7 133 249 - -
Pral2514g00001 510 Pfam Protein kinase domain 173 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2514g00001 510 SMART serkin_6 172 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2514g00001 510 PANTHER OS08G0249100 PROTEIN 137 468 IPR046958 -
Pral2514g00001 510 Gene3D Transferase(Phosphotransferase) domain 1 250 466 - -
Pral2514g00001 510 FunFam Putative receptor-like serine/threonine-protein kinase 250 467 - -
Pral2514g00001 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Pral2514g00001 510 ProSiteProfiles Protein kinase domain profile. 172 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2514g00001 510 Gene3D Phosphorylase Kinase; domain 1 157 249 - -
Pral2514g00001 510 SUPERFAMILY Protein kinase-like (PK-like) 160 468 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2514g00001 Pral-Chr2514 19425 22650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2514g00001 159 452 Trihelix Transcription Factor Family AT1G70460 42.761 9.06e-71 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral2514g00001 Pkinase 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2514g00001 - - qsa:O6P43_020598 775.007