Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2511g00003 ATGTTCTTTATGGGATTCGACAAAAAAGCTTGGTCTTTACTTGCTTTATTCATTGCATGTTCGTTCTCTTCTACTCTTACGGTCTGTGCCTTGGATTCCATTACATCTTCTGCGTTGATCCAAGAACCTCAAACAATAAGCTCAAGGAATGACATGTTCACGTTGGGATTCTTCAGTCCTCAAAATTCCACCAATCGTTACGTGGGAATTTGGTACATGTCCAAATCCTCTATTGTTTGGGTTGCTAACAAAAACAACCCAATACCAGATTCTTCTGGGATTCTCACAATATCAGAAAATGGCAATCTTGTCGTTTTGGATGGGCAAAAGCAGGTTGTTTGGTCAACAAATGTCTCCCATATTGCATCAAATTCCAGAGCTCAACTCCTAGATTCTGGCAACCTCGTCCTTGCAGATGGAAGTCCACGAGCATATATGTGGCAAAGCTTCCTACATCCTAGTAATACATTATTACAAGGCATGAAATTGATTGCTTACAGAAAAACAGGCAAGACAGTGAAACTTACATCATGGAAAAGTCCATCTGATCCATCTGATGGAAGATTTTCTTTTGCTCTTGAAATCGGAAATGTGACTGAAATATTCCTGAGGGAAGGAACTCGTCCTAGATGGCGCAGTGGTCCTTGGAACGGCTTCGACTTTCTTGGGATAGCCAGGCTAATTTCACGTAACCCAAAAGATGGGATTCTGATGGAAGAAGACGAAGACAGTTCTAGGTTGTCTTTATATATGCACAATTTTACCGTGGCTTATACTTTGGTTCCTCAAGGTCAATTAGAGCGAAGACGTTGGAATTCCCAGACACATACATGGGAACTTGTGAGGTCATTACGATCTTCAGAGTGTGATGTTTATGGCAAATGTGGCCAATTTGGGATTTGCGATTCGCAGAGCTCCCCAATCTGTAGCTGCCTGAGGGGCTTTGAACCAAAGAGCAAAGAAGAATGGGCAAGGCAGAATTGGACCAGTGGGTGTGTGAGAAGAGTAGCACTTCAGTGTGAAAGAAGCACAAATGATTCTCAAGATAGCAAAATAGATGGGTTTTTTATGGTGAAGAGTGTGAAAATTCCAGATGATGCTCAGGTGTTAGCTACTTATGATGGGCATCCTGCTGCAGACTGTCAAACTTCATGCCTCAAGAATTGCTCTTGTAAAGCTTATGCCTTTGAAAGAAACCTTGGCTGTATGATTTGGACTGCAGATTTAGTTGACATACAAAGCTTCTCATATGGAGGACTCGACTTTTACATACGTTTAGCCTACTCAGAACTAGGCACTGGCAGGAGGAAAATAACGAAACCCATTATAATAGCAGTTTTGGTAGGAACAATTCTCATTACTGCATCTGCATATTTCTTGTGGAAAAAACGCTCAAAGAGAAAAGGAGAAACGCAGACTCATGACAATAGGAGTATGACTTTGAAGCAAGTCCATATTCCAGAGCTATTATTGTTTGATTACACAAAGCTGGCAACTGCAACAAACAACTTTGACACAGCAAATAAACTTGGACAGGGTGGTTTCGGTCCAGTTTACCAGGGAAGGTTGGAAGATGGGAAAGAAATAGCTGTAAAAAGACTATCAAAATTGTCTAGACAGGGTATGGAAGAATTTATAAATGAAGTGGAGCTGATTTCTGGGCTTCAACACCGAAACCTTGTTAAACTTCTTGGCTATTGCGTTGAAGAACAAGAAATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATTTATATATCTTCGATCCAAAGCACCAAAATGTATTCGATTGGGGGAAGCGCTTCAACATAATTGAGGGAATAGCTAGGGGGTTACTTTATCTTCACAGAGATTCAAGATTAAAAATTATACATAGAGATTTGAAAGCAAGTAACATATTATTAGATGAAAAGATGAATCCAAAAATATCAGATTTTGGAATGGCTAAACTTTATAAAGTGGCTACATTTCTCCCGAATATGCAACCGAAGGACTCTATTCAGAGAAATCTGATAATTTTAGCTTTGGTGTTCTACTACTAG 2046 0.3978 MFFMGFDKKAWSLLALFIACSFSSTLTVCALDSITSSALIQEPQTISSRNDMFTLGFFSPQNSTNRYVGIWYMSKSSIVWVANKNNPIPDSSGILTISENGNLVVLDGQKQVVWSTNVSHIASNSRAQLLDSGNLVLADGSPRAYMWQSFLHPSNTLLQGMKLIAYRKTGKTVKLTSWKSPSDPSDGRFSFALEIGNVTEIFLREGTRPRWRSGPWNGFDFLGIARLISRNPKDGILMEEDEDSSRLSLYMHNFTVAYTLVPQGQLERRRWNSQTHTWELVRSLRSSECDVYGKCGQFGICDSQSSPICSCLRGFEPKSKEEWARQNWTSGCVRRVALQCERSTNDSQDSKIDGFFMVKSVKIPDDAQVLATYDGHPAADCQTSCLKNCSCKAYAFERNLGCMIWTADLVDIQSFSYGGLDFYIRLAYSELGTGRRKITKPIIIAVLVGTILITASAYFLWKKRSKRKGETQTHDNRSMTLKQVHIPELLLFDYTKLATATNNFDTANKLGQGGFGPVYQGRLEDGKEIAVKRLSKLSRQGMEEFINEVELISGLQHRNLVKLLGYCVEEQEILVYEYMPNKSLDLYIFDPKHQNVFDWGKRFNIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEKMNPKISDFGMAKLYKVATFLPNMQPKDSIQRNLIILALVFYY 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2511g00003 681 FunFam Os07g0541700 protein 579 663 - -
Pral2511g00003 681 SMART blect_4 37 153 IPR001480 -
Pral2511g00003 681 CDD PAN_AP_plant 336 427 - -
Pral2511g00003 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Pral2511g00003 681 Gene3D Transferase(Phosphotransferase) domain 1 579 667 - -
Pral2511g00003 681 SMART serkin_6 504 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2511g00003 681 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Pral2511g00003 681 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 184 IPR036426 -
Pral2511g00003 681 ProSiteProfiles Protein kinase domain profile. 504 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2511g00003 681 ProSiteProfiles PAN/Apple domain profile. 340 427 IPR003609 -
Pral2511g00003 681 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 578 - -
Pral2511g00003 681 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Pral2511g00003 681 Pfam Protein kinase domain 506 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2511g00003 681 Gene3D - 27 150 IPR036426 -
Pral2511g00003 681 SMART ntp_6 350 426 IPR003609 -
Pral2511g00003 681 Gene3D Phosphorylase Kinase; domain 1 463 578 - -
Pral2511g00003 681 SUPERFAMILY Protein kinase-like (PK-like) 478 657 IPR011009 -
Pral2511g00003 681 Pfam D-mannose binding lectin 78 179 IPR001480 -
Pral2511g00003 681 Pfam PAN-like domain 351 412 IPR003609 -
Pral2511g00003 681 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 654 - -
Pral2511g00003 681 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 150 - -
Pral2511g00003 681 CDD B_lectin 44 153 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2511g00003 Pral-Chr2511 45197 49161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2511g00003 438 655 Receptor kinase-like Gene Family AT4G23190 53.182 3.05e-71 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2511g00003 Pkinase 6.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2511g00003 - - qsa:O6P43_012540 711.449