Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2511g00001 ATGTCGTCTTCAAAGATATCAATGATTAGGCAGATTGATGATTCAATAGATAAGTGGAAGATTGTTGCCCGTGTTATTAGGAGATGGAATGCCTATGAAAAAGATTCTCCTACTGATCTTTATTGTATTTCAATGCTTCTCATTGATGAAGAGGGAACGAGGATCCAAGCATCCATTACTAATAAGAGTGCTTTCAAGCTATATGAGGACAAAGCTTTAGAAGGAAGGATCTATTTCTTTACTAATTTTTCTGTGACAGGTAACACTAAGGAATTCAGGGCAACTAATCATCCATTTAAGATTACATTGGGCAGACACACATATGTGAAGGAAAGGGAAGCTAATATACCTGAGTACTCATATAATTTCTTCCCCATATCCGAAATCATAAAAGTCATTGATAAGAAGAGGGTTGACTATCTTATTGATGTGATTGGATTTGTAACTTCAATTGGCCTACTGGAAGAATTCCGTAATAATTTTGAAATAAAGAACAGGATGCGATTAACCTTGTCTGATAACCTGGAAAACATTGTGTCTTGCGTCTTGTATGATGAATGTGCAACAGATGTGTGCATGATTGACTTCACTAAGTTGGATGCTCCGGTGGTGATGATTATTCAGCTAGCCAGAGTTGGTTTTAATGAGAAAGTCTATTATTATGTTATTTGTATATGGGATATGATAATTATGTTCCATAGCAGTGCAAAGTCGTTACCTTCCCCCATGATTAGCACAATATCTGCAAGTCTACCTTCTCAAGCATCAAAGGCATCTGAAAGCTCTCTTATTGGGAAACATTCCCTGATCTCGATTGTTGATATAGCAAAACAAGCTATGGGTGATTATTTCTGGATCAAGTGCAAGGTCATTAAAGTGGATACAGGGCATGGATGGAAATATATAGGGTGTTCTAGATGTGGCAGTAAGCCTAAAGATGATGATGTCAAGCAGCCTTGCAATAGCAAGTCATGCAAGAACAAGCCAACTACTTATGAGTCTAAGCTGAGAGTCCATTACACAGTTATGGATGAATCTGGAAAGGTTACTATTGTATTTTTTGACAAGTTGGCTGTTCAATATATTGGCAAAACTGCTGTTGAGCTAGAAAAGGGTCTGTCGAAGGATGAGGATGGGTATGTTGATGTCCCTGGTGAATTAGATCATCTTGTAGGGAAAACATTGTTGCTTAAAATGAAGCTAAACCAATATAATGTAGATTTTCCCCATTCGAGTATTTTTGTTGCTACATATACTGAAGTTGCTGATCTGATGGACGAATTTAACAGGGCTAGCGATGTAAATGAAGAGGCGAATGATGAGGGATTTGACTATGTAGTTGTGGATGAGGATTTGGCCGAGGGTAGTTTTGTGCCTAAGTCTGTACCGTGTGTGATTGAAGATAAGGTTGAAGAAGATGTTGATTTTGATGGTGTTCCTGTTTCTGAGATTTTACCAATGGCCATGTATAATAAGGGGAAGAGGAAGAGTGTTGCCAAGAAGAGCGTGGGGGGGGGGAATAAAGGCCTTGAGCTCATCAAATGTTTCACCAGTTAA 1557 0.3841 MSSSKISMIRQIDDSIDKWKIVARVIRRWNAYEKDSPTDLYCISMLLIDEEGTRIQASITNKSAFKLYEDKALEGRIYFFTNFSVTGNTKEFRATNHPFKITLGRHTYVKEREANIPEYSYNFFPISEIIKVIDKKRVDYLIDVIGFVTSIGLLEEFRNNFEIKNRMRLTLSDNLENIVSCVLYDECATDVCMIDFTKLDAPVVMIIQLARVGFNEKVYYYVICIWDMIIMFHSSAKSLPSPMISTISASLPSQASKASESSLIGKHSLISIVDIAKQAMGDYFWIKCKVIKVDTGHGWKYIGCSRCGSKPKDDDVKQPCNSKSCKNKPTTYESKLRVHYTVMDESGKVTIVFFDKLAVQYIGKTAVELEKGLSKDEDGYVDVPGELDHLVGKTLLLKMKLNQYNVDFPHSSIFVATYTEVADLMDEFNRASDVNEEANDEGFDYVVVDEDLAEGSFVPKSVPCVIEDKVEEDVDFDGVPVSEILPMAMYNKGKRKSVAKKSVGGGNKGLELIKCFTS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2511g00001 518 PANTHER OS03G0429900 PROTEIN 286 405 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pral2511g00001 518 SUPERFAMILY Nucleic acid-binding proteins 120 216 IPR012340 -
Pral2511g00001 518 CDD RPA1_DBD_A_like 20 109 - -
Pral2511g00001 518 Gene3D - 114 235 IPR012340 -
Pral2511g00001 518 Coils Coil 421 441 - -
Pral2511g00001 518 Pfam Domain of unknown function DUF223 45 131 IPR003871 -
Pral2511g00001 518 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
Pral2511g00001 518 SUPERFAMILY Nucleic acid-binding proteins 277 427 IPR012340 -
Pral2511g00001 518 Gene3D - 4 111 IPR012340 -
Pral2511g00001 518 Gene3D - 254 429 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2511g00001 Pral-Chr2511 5093 7719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2511g00001 3 382 Core DNA Replication Machinery Family AT5G08020 25.123 2.21e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2511g00001 - - pcin:129290097 393.275