Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2507g00001 ATGGCAAAACCTAACAAGTTACTTTGTGCTTTTTTGGCTCATATTTTAGCTATAGTAGCCACCATTTCCGGGAATATTTGGTTTGCTCTGGGGGCATCTTCCTCGGATCCGTTTGTTCAGCAACAACTGGACAGGGTTGATAGGCTGCCGGGTCAAACGTTTAACATCGAATTCGCACATTACTCTGGGTATGTCACAGTCAACCAGGAATCTGGGAGGGCACTGTTTTACTGGTTCTTCGAAGCTGCTTCAGGCCCTGAAACGAAGCCACTTGTTCTATGGCTCAATGGAGGACCTGGCTGTTCCTCCATTGCCTATGGGGAAGCAGAGGAAATTGGTCCCTTTCACATTCAGCCAGATGGCAGGACCCTTTATCTAAATCCATACTCTTGGAATCAAGTTGCCAACATTCTTTTTCTTGATTCTCCCGTTGGAGTTGGATTTTCGTATTCAAACACTTCATCCGACATAGAGAACAATGGGGATAAGAGGACTGCTGACGACTCGTTGGAATTCCTATTGAAGTGGCTTGAGCGGTTTCCTCAGTATAAAGGAAGAGATTTCTTTATCTCCGGTGAAAGCTATGCAGGGCATTATGTTCCCCAACTTAGCCAGGTTATTGTGAATTACAACAAGAACGCCAAAGAAAAAGTTATCAATCTGAAAGGTTACATGGTAGGAAATGCTCTAACTGATGATTACAATGATCACAAGGGAGTTGCCCAGTTTTTGTGGTCATCCGGTTTGATTTCTGATCAAACATATCAGCAAATGAACCTTCAATGTGATCACGAGTCTTTCATAAATCCTTCAGATTCATGTGTAAAAACTTTAGATAATGCTGACAAAGAAATTGGCCTCGTTGATCAGTACAGTATTTTCACTCCTACATGCGCTGCTAATGTTAGCCAGGCAAACCAGCTGGTGAAAAGAAAGCATAAAATTGGCAGACTTAGAGCCGTATACGATCCTTGCACTGAGAAGCATTCCACTATATACTTCAATCTACCTGAGGTCCAGGAGGCTCTTCATGTTGATCCAGCTCACAGGCCTGCTGAATGGCAGACCTGCAGTGACAAGGTACGTGGAAACTGGAAGGATTCTCCATTGACAGTGCTTGATATTTACCGTGAACTAATTCAGGCGGGACTGAGGATATGGATGTTCAGTGGTGACACAGATGCTGTGATCCCAGTGACATCCACTCGCTACAGCATAGATGCTCTGGAACTTAAAACTGTGAGACCTTGGCGTCCTTGGTATGACGATGGGCAGGTGGGAGGATGGACACAAGAATATGAAGGACTCACTTTTGTGGCAGTAAGGGGGGCAGGGCACGAGGTTCCTCTGCACAGACCAAAATATGCTCTCTCTCTTATCAAAGCCTTCCTTGCTGGAACTTCCATGCCTTCCCTTGACCTTCAGCTTGTCAGTGCCTCTTGA 1443 0.4505 MAKPNKLLCAFLAHILAIVATISGNIWFALGASSSDPFVQQQLDRVDRLPGQTFNIEFAHYSGYVTVNQESGRALFYWFFEAASGPETKPLVLWLNGGPGCSSIAYGEAEEIGPFHIQPDGRTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDIENNGDKRTADDSLEFLLKWLERFPQYKGRDFFISGESYAGHYVPQLSQVIVNYNKNAKEKVINLKGYMVGNALTDDYNDHKGVAQFLWSSGLISDQTYQQMNLQCDHESFINPSDSCVKTLDNADKEIGLVDQYSIFTPTCAANVSQANQLVKRKHKIGRLRAVYDPCTEKHSTIYFNLPEVQEALHVDPAHRPAEWQTCSDKVRGNWKDSPLTVLDIYRELIQAGLRIWMFSGDTDAVIPVTSTRYSIDALELKTVRPWRPWYDDGQVGGWTQEYEGLTFVAVRGAGHEVPLHRPKYALSLIKAFLAGTSMPSLDLQLVSAS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2507g00001 480 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Pral2507g00001 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 453 IPR001563 GO:0004185|GO:0006508
Pral2507g00001 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Pral2507g00001 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Pral2507g00001 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Pral2507g00001 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Pral2507g00001 480 FunFam Carboxypeptidase 322 469 - -
Pral2507g00001 480 SUPERFAMILY alpha/beta-Hydrolases 46 469 IPR029058 -
Pral2507g00001 480 ProSitePatterns Serine carboxypeptidases, histidine active site. 436 453 IPR033124 GO:0004185
Pral2507g00001 480 Pfam Serine carboxypeptidase 50 465 IPR001563 GO:0004185|GO:0006508
Pral2507g00001 480 Gene3D - 372 466 - -
Pral2507g00001 480 FunFam Carboxypeptidase 372 466 - -
Pral2507g00001 480 FunFam Carboxypeptidase 40 300 - -
Pral2507g00001 480 Gene3D alpha/beta hydrolase 41 300 IPR029058 -
Pral2507g00001 480 Gene3D - 325 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2507g00001 Pral-Chr2507 2557 7332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2507g00001 335 469 Calmodulin-binding Proteins AT2G22960 23.529 2.32e-09 55.1