Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2502g00011 ATGGATCGGGTCATAGTTCGAGTCAAGCGAGGCCTGAATCTGGCTATCAGAGATGCCGAAAGCAGCGATCCTTACGTTCTCATCAAAATGGCCAATCAGAAATTGGAGACTCGTGTGGTGGAGAGGAATATCAATCCTGAGTGGAATGAAGACCTGGCTTTATCCATTTCAGATCCACATCTCCCAGTCCAACTTTTTGTGTACGACAAGGACAAATTTTTTGATGACAAAATGGGGGAGGCTGAGTTTGACATTAATCCCTTTCTTGAAGTTGCGAAGAAGCGGTTGGAATTAGAAGGCCTCCAGGATGGAACAATCATCACAAAAATAGAACCCAACCGGCAAAACTGTCTGGCTGAGGAGAGCCAAATTGTGTGGAAAGATGGCAAAGTTGTCCAAAACATGTTTCTTAGACTGAAGAATGTGGAATCTGGGGAAGTGGAGCTCCAATTATCAATGGAGAACATGTTGGGTCTGCTCAGAATTCGCGTCCAAAGAGGCATAAATCTTGCCATCAGAGATACCTTCAGCAGAAGCAGTGATCCTTGTGTTGTCTTCCAAATGGGCAAGCAGAAATTGAAGACTCGAGTAGTGAAGAGGAGTCTCAATCCTGAGTGGAATGAAGATTTAACTTTATGCATTTCAGATCCTCCTCTCCCAGTCCAACTTTTTGTGTATGACAGAGACATATTTAGCTTTGATGACAAAATGGGGGAGGCTGAGTTCGACATTAATCCAATTGTTGAAGCTGTGAAAATGGGTTTGGAAGGCCTCCCTGATGGAACTACCATAAGAACAATACTGCCGAACCGGCAAAACCGTCTTGTTGAAAGGAGCCAAATTGTGTGGAAAGATGGTCAAGTTGTTCAGAACATGGCCCTTAGATTGAAAGATGTTGAGTGTGGGGAAGTGGAGCTCCAATTGCGATGGATTAAGCTTCCCACTCCCAGTGGCCTCTAG 960 0.4458 MDRVIVRVKRGLNLAIRDAESSDPYVLIKMANQKLETRVVERNINPEWNEDLALSISDPHLPVQLFVYDKDKFFDDKMGEAEFDINPFLEVAKKRLELEGLQDGTIITKIEPNRQNCLAEESQIVWKDGKVVQNMFLRLKNVESGEVELQLSMENMLGLLRIRVQRGINLAIRDTFSRSSDPCVVFQMGKQKLKTRVVKRSLNPEWNEDLTLCISDPPLPVQLFVYDRDIFSFDDKMGEAEFDINPIVEAVKMGLEGLPDGTTIRTILPNRQNRLVERSQIVWKDGQVVQNMALRLKDVECGEVELQLRWIKLPTPSGL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2502g00011 319 ProSiteProfiles C2 domain profile. 1 98 IPR000008 -
Pral2502g00011 319 CDD C2_ArfGAP 6 145 - -
Pral2502g00011 319 SMART C2_3c 3 97 IPR000008 -
Pral2502g00011 319 SMART C2_3c 159 256 IPR000008 -
Pral2502g00011 319 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 140 248 IPR035892 -
Pral2502g00011 319 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 155 315 IPR044562 -
Pral2502g00011 319 Pfam C2 domain 158 247 IPR000008 -
Pral2502g00011 319 Pfam C2 domain 4 90 IPR000008 -
Pral2502g00011 319 ProSiteProfiles C2 domain profile. 143 257 IPR000008 -
Pral2502g00011 319 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 90 IPR035892 -
Pral2502g00011 319 Gene3D C2 domain 156 317 IPR035892 -
Pral2502g00011 319 CDD C2_ArfGAP 157 302 - -
Pral2502g00011 319 Gene3D C2 domain 2 155 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2502g00011 Pral-Chr2502 29396 33317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2502g00011 192 319 C2H2 Transcription Factor Family AT1G70790 53.077 1.69e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2502g00011 - - sind:105158069 234.572