Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2502g00010 ATGGATCGGGTCATAGTTCGAGTCAAGCGAGGCCTGAATCTGGCTATCAGAGATGCCGAAAGCAGCGATCCTTACGTTCTCATCAAAATGGCCAATCAGAAATTGGAGACTCGTGTGGTGGAGAGGAATATCAATCCTGAGTGGAATGAAGACCTGGCTTTATCCATTTCAGATCCACATCTCCCAGTCCAACTTTTTGTGTACGACAAGGACAAATTTTTTGATGACAAAATGGGGGAGGCTGAGTTTGACATTAATCCCTTTCTTGAAGTTGCGAAGAAGCGGTTGGAATTAGAAGGCCTCCAGGATGGAACAATCATCACAAAAATAGAACCCAACCGGCAAAACTGTCTGGCTGAGGAGAGCCAAATTGTGTGGAAAGATGGCAAAGTTGTCCAAAACATGTTTCTTAGACTGAAGAATGTGGAATCTGGGGAAGTGGAGCTCCAATTATCAATGGAGAACATGTTGGGTCTGCTCAGAATTCGCGTCCAAAGAGGCATAAATCTTGCCATCAGAGATACCTTCAGCAGAAGCAGTGATCCTTGTGTTGTCTTCCAAATGGGCAAGCAGTTTGTGTATGACAGAGACATATTTAGCTTTGATGACAAAATGGGGGAGGCTGAGTTCGACATTAATCCAATTGTTGAAGCTGTGAAAATGGGTTTGGAAGGCCTCCCTGATGGAACTACCATAAGAACAATACTGCCGAACCGGCAAAACCGTCTTGTTGAAAGGAGCCAAATTGTGTGGAAAGATGGTCAAGTTGTTCAGAACATGGCCCTTAGATTGAAAGATGTTGAGTGTGGGGAAGTGGAGCTCCAATTGCGATGGATTAAGCTTCCCACTCCCAGTGGCCTCTAG 864 0.4502 MDRVIVRVKRGLNLAIRDAESSDPYVLIKMANQKLETRVVERNINPEWNEDLALSISDPHLPVQLFVYDKDKFFDDKMGEAEFDINPFLEVAKKRLELEGLQDGTIITKIEPNRQNCLAEESQIVWKDGKVVQNMFLRLKNVESGEVELQLSMENMLGLLRIRVQRGINLAIRDTFSRSSDPCVVFQMGKQFVYDRDIFSFDDKMGEAEFDINPIVEAVKMGLEGLPDGTTIRTILPNRQNRLVERSQIVWKDGQVVQNMALRLKDVECGEVELQLRWIKLPTPSGL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2502g00010 287 Gene3D C2 domain 140 192 IPR035892 -
Pral2502g00010 287 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 155 280 IPR035892 -
Pral2502g00010 287 Pfam C2 domain 4 90 IPR000008 -
Pral2502g00010 287 ProSiteProfiles C2 domain profile. 1 98 IPR000008 -
Pral2502g00010 287 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 155 191 IPR044562 -
Pral2502g00010 287 SMART C2_3c 3 97 IPR000008 -
Pral2502g00010 287 CDD C2_ArfGAP 6 145 - -
Pral2502g00010 287 Gene3D C2 domain 2 113 IPR035892 -
Pral2502g00010 287 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 90 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2502g00010 Pral-Chr2502 29388 33317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2502g00010 193 287 C2H2 Transcription Factor Family AT1G70790 52.577 2.40e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2502g00010 - - qsa:O6P43_014306 204.527