Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2501g00004 ATGGAAAGGGATCAAGAACAAGATAAGGGGATGATGAATGAAACTAGGCCGAGCAATATTGACATCCCAAAAGCTGTTTCTCCAGTTTCTTTCGCAGCTGATCAGGAAGAAACCGTCCGGCGACCTCGTGGCCGGCCGGCCGGATCCAAGAACAAGCCAAAGCCACCCATTATTGTGACTAGGGATAGTGCTAATGCCCTGAAAGCTCATGCACTGGAAGTGACTTCTGGGTGTGATATCAATGAAAGTTTGGTCAACTTTGCAAGAAGGAAGCAGAGAGGGATTTGCATACTCAGCGGAACTGGTTGTGTCACAAATGTAACACTGCGCCAGTTAGCTTCTTCTGGTGCAACAGTGACGCTTCATGGTAGGTTTGAGATTCTCTCCCTTCTGGGTTCAATCCTGCCGCCGCCGGCTCCGCCGGGGATCACCGGACTGACCATTTACCTTGCCGGAGCTCAAGGGCAGGTTGTGGGTGGTGCTGTGGTGGGTGCCCTGGTTGCTTCAGGTCCTGTGGTGATTATGGCTGCTTCGTTCATGAATGCTACCTTTGATCGTCTTCCATTAATGGAGGACGACGAGATCATTGCTCAGAATCAGCATTACCAGAACAATGGTCGAAGCCATCATCATCATCATCTTCATCATCACCACCTTGATGCCTCAGATTTGTATGGAATGCCTCAGAACTTGCTCACAAATGGCACAATCCCTCCTGAGATATACTCATGGACTACTCCTGGCCGTAACTTCTCAAAAGCCTGA 765 0.4967 MERDQEQDKGMMNETRPSNIDIPKAVSPVSFAADQEETVRRPRGRPAGSKNKPKPPIIVTRDSANALKAHALEVTSGCDINESLVNFARRKQRGICILSGTGCVTNVTLRQLASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALVASGPVVIMAASFMNATFDRLPLMEDDEIIAQNQHYQNNGRSHHHHHLHHHHLDASDLYGMPQNLLTNGTIPPEIYSWTTPGRNFSKA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2501g00004 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 211 IPR014476 GO:0003680
Pral2501g00004 254 FunFam AT-hook motif nuclear-localized protein 67 194 - -
Pral2501g00004 254 CDD DUF296 70 150 IPR005175 -
Pral2501g00004 254 PIRSF ESCAROLA 1 252 IPR014476 GO:0003680
Pral2501g00004 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 180 IPR005175 -
Pral2501g00004 254 ProSiteProfiles PPC domain profile profile. 64 203 IPR005175 -
Pral2501g00004 254 MobiDBLite consensus disorder prediction 1 57 - -
Pral2501g00004 254 Gene3D - 66 217 - -
Pral2501g00004 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 64 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2501g00004 Pral-Chr2501 52199 52963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2501g00004 22 253 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 68.534 5.61e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2501g00004 - - pcin:129317250 355.525