Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2501g00003 ATGCAGCCAGATCAAAGAAAAAAGAGTTCAACAGAGATTGAATTTTTCTCTGAATATGGTGATGCCAACAGATATAAAATTCAAGAAGTCATTGGAAAAGGAAGTTATGGCGTTGTTTGTTCAGCAATTGACACTCACACCAGTGAGAAAGTGGCAATAAAGAAGATACATGACATCTTTGAGCACATCTCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTTCGGCATCCAGATATTGTTGAAATTAAACACATCATGCTGCCTCCTTCTAGCAAGGACTTTAAGGATATTTATGTTGTTTTTGAGCTTATGGAGTCTGATCTTCACCAAGTCATTAAAGCTAATGATGACTTAACGAAAGAGCACTATCAGTTTTTTCTTTACCAGCTACTTCGAGCATTGAAGTATATTCACACTGCAAACGTCTATCATCGAGATCTGAAACCAAAGAATATATTGGCCAATGCAAATTGTAAACTCAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACTCACCAACTACTATATTTTGGACGGATTATGTTGCCACAAGATGGTATAGAGCTCCAGAGCTTTGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATCTGGAGTATAGGTTGCATCTTTGCAGAAGTACTTACAGGAAAACCACTTTTTCCTGGTAAAAATGTCGTCCATCAGTTGGATCTGATGACTGATTTGCTTGGGACTCCCTCACTGGATACAATATCTCGGGTTCGTAATGATAAGGCGAGGAGATATCTGACTAGCATGAGGAAAAAGCAACCTGTGCCATTTTCACAAAAATTTCCTAATGCAGATCCTTTAGCTCTACGATTACTGGAAAGATTGCTTGCTTTTGATCCGAAAGACCGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTTAAGGGATTGGCAAAGGTTGAGAGGGAACCGTCCTGCCAGCCTATCAGTAAAATGGAGTTTGAGTTTGAAAGGCGAAGAGTTACAAAGGAGGAAATACGAGAGCTAATTTTCCGTGAGATTTTGGAGTATCATCCGCAACTGTTGAAGGACTACATAAATGGAACAGAGAGACCTAATTTTCTTTATCCGAGTGCTGTTGATCACTTCAGGAAGCAATTTGTTCATCTTGAGGAAAATAGTGGTAAAAATGGCCCCATGCCTCTTGAAAGAAAGCACGTTTCTCTTCCAAGGTCAACGGTTGTGCATTCAAATATGGTTGTACCAAAAGAGCAATCGGATATCAATTCCGGCAAGAACAGGCAAACATCTGAGGAATATAATAAGAATCCCAGAGATACAGAAATTTCTGTTACAAGGTCAATGCAGGGGCAGCTGAGAGTCCCAATGGCAAAACCCGGAAAAGTAGTTGGACCAGTTGTTCCTTACGAGTACGCGAGTGTGGTCAAGGACTCTTATGATCCAAGGACATTTATCAGAGGTTCTATGCTTCCTTCTCAAGCTGTTCACCCTACTTATTATTACCACAGATCGAGCTCTGGAAATCAAGAAAGGTCAGCTACAACAGAGTCTGATAAGGGTGTATCCGTGCAAGCCAAACACGCGCATTCTGAAGTTCGTGCCAAAATAGCTCCAGATATAGCTATTAATATTGATACAAACCCTTTTTTTATGACACGGGCAGGAGTGAACGGCATCGAACAGGATGATCGAATAGCTATGGATACGAATCTAATACCAACGAAGGCTCAATATGGTCGGATTGGTGCCACCACAACGGCAACTACTGGTCATAGAAAGGTTGGTCCTGTTCAGTATGGCATGACTGGTATGTTTTAG 1845 0.4114 MQPDQRKKSSTEIEFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTSEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDSPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYINGTERPNFLYPSAVDHFRKQFVHLEENSGKNGPMPLERKHVSLPRSTVVHSNMVVPKEQSDINSGKNRQTSEEYNKNPRDTEISVTRSMQGQLRVPMAKPGKVVGPVVPYEYASVVKDSYDPRTFIRGSMLPSQAVHPTYYYHRSSSGNQERSATTESDKGVSVQAKHAHSEVRAKIAPDIAINIDTNPFFMTRAGVNGIEQDDRIAMDTNLIPTKAQYGRIGATTTATTGHRKVGPVQYGMTGMF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2501g00003 614 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2501g00003 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 370 - -
Pral2501g00003 614 MobiDBLite consensus disorder prediction 511 530 - -
Pral2501g00003 614 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2501g00003 614 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Pral2501g00003 614 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2501g00003 614 MobiDBLite consensus disorder prediction 425 446 - -
Pral2501g00003 614 FunFam Mitogen-activated protein kinase 15 118 - -
Pral2501g00003 614 MobiDBLite consensus disorder prediction 511 535 - -
Pral2501g00003 614 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral2501g00003 614 FunFam Mitogen-activated protein kinase 111 339 - -
Pral2501g00003 614 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pral2501g00003 614 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Pral2501g00003 614 MobiDBLite consensus disorder prediction 425 439 - -
Pral2501g00003 614 CDD STKc_TDY_MAPK 24 361 - -
Pral2501g00003 614 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2501g00003 Pral-Chr2501 28437 34548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2501g00003 1 446 MAP Kinase Gene Family AT2G42880 85.459 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral2501g00003 Pkinase 8.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2501g00003 - - gmx:100811788 1032.32